Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1873 ATGGAGGTTCCTGTTTTGAAGGGTGAGGATTTGGCGCATAAAACAGAGGCATTAAACTTGACAATTCAGGACAATCTGGTGAAGCCTGTTGTACAACAAGAAAGGGTCTTCGATTGGGATTCGAATAACAATGAAAATATCAGGTTAGCAGAAAATGGGAGCAAGAGTAGTTTAAGCTGTGATGATTGCGTTGAAAGAGTTGACATCGGGATGGAGGTGAAGAAAAAAGATGATTTGAACGATCAGGTGCAGATTGGTGGTCGTGTAATGTCCTCAGTGTCCGAGGGAGCTGACAAGATATCTGATGATCAAGAGGCACTAAACTTGACGGTTGAGAATAAGGATGCGGAGCCAACTGTGCAAGAATGTGACTTAGATTGGTATATGAGTAAGGGTGGAAATGTGGGGTGTGTTGATGACAGGAGCAAAATGAGTAGTTTAAGCTGTGATGATAGCATTAGAGGGGTCGACATTGAGGTGGAGGTGATGAAGAAAGATTATTTGGATGATAAAATGCAGATTAGTGGTGGAGTATTGCGCTCAGAGTCAAAGAGAGCAGTCAGTAAAATATCTGAGGGAGAGACAACCGATAATGAGGAAGTGAAGCTAAACCAACAACCATGTGACTTAGATTTGGATGTGAGCAAGAGTGGAAATGTTGGATTGGCTAGGACCGGGATTAAAAGGAATACTTTAAGGTCTGGTCATTGCTTTGAAGGGCTTGATATTGAGATGGAGTTGAAGAAGAAAAATAATGCAAATGATGAAGTGAAGACTAGTGGTCGAGTATTGCGTTCAATGTCAAAGAGAATAGACAATAAGATATTTCATGGTGGAGAAGCTGATGAGTTGCTGGCTGGGAAAAATGGAGAGAATGAACATGTTTGGTTTGAGAAAAATAAGGTTGAGGCAGAAAAGGAAGAACGGGATTATTTTGTTAGTAGCAGTTATGAGAAGGAGAGAGTTGATGTGAAAATGGATGGCAAAGAAAGAAGGAAGTTGAAACGGAAGCGTGGCAGGCCCCCTAAATTGAAGATGGAAGAGCAAGATCAATCAGTTAGTAATATGCAAGAGAAATGTGGCGGTCCTCCCAAATTGAAGATGGAAGAGCAATATCAACTTGTTGGTACCCTGCAACGAAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGCAAGATCAATCAGTTGGTAATATGCAACAGAAACGTGGCAGTCCTCCCAAATTGAAGATGGAAGAGCAAGATCAACTGGTTGGTAACTTGCATCGGAAGCGTGGAAGGCCCCCCAAAGTGAAGATGGAAGAGCAAGATCAACCAGGTGGTCATATGCAACGGAAGCGTGGAAGGCCCTTCAAAGTGAAGATGGAAGAGCAAGATCAACTTCCTGGCAAAAAAAAGCCATGGAAGCGTGGAAGGCCTCCCAAAAATAGGCAGAAAATTAATCATCTGGAAGTAGCACAAAACAGAAAACGAAAGAAGGGCTTTCGAAAATGCAAGAAAGGTATAACTGTGATAGATGGTACAAATATGGATGCAGTTGATGATATGTGCTTGAAAATGGGATCTTGTGTAAAAGAATCAAAAAAGAAGAGATTGACTTCAACATTAACATCAAATTCTGCAAATCCTCTCATTAAGAAGAAAATAGGAAGTAATAAAGCGAAGCAGTCGGTGAGGCAACACATTTTGGAGCTGCTCTTGGCTGCTGGCTGGGTTGTTGATTATAGACCTAGGAATGGTAAAGAGTATAATGATGCAGTGTACGTTAGTCCAAATGGAAGGACTCACTGGTCAATTACCTTGGCCTACAAAAGGCTTCAGATGCATTGTGAAGCTGGTGGTGGTGAAGGTGAGGTATACATTCCAGGTTTTAAATTTGTGCCCATACCATTTGAGGAATTCAATATTCTAACTAAGGTTATTAAAAAGAGAAGGAAAAACAAAGATAAATTGAAGCAAACAGGAGGAAAAGATGGAGGCATAAATATGTCATTGAAGGGTAAAGTGAAGAGAAAAATTTCACTTGTTGAGGAGTACAATTTAGACGAAACATCACTCAAAAGGTTTCCAGCTCTGGTAAATGATCGTAAACGGCAGAAAACACACAATAAGAAGCAAAGTGTTTTTATGGTTCGCAATGCTGAGGAGATGGATTCGGAAACTAATGGATACGTACTTTACACTGGAAAACGAACTGTGCTTGCTTGGATGATTGATTTGGGAACAGTGCTGCAAAATGAGAGGGTTCATTATGTGAACCACAGAAGGAAAGGTGCAAAACTGGAGGGTAGGATTACAATGGATGGAATTCATTGTGACTGCTGCAGTGAAATTGTAACAATGTCGGAATTTGAAGCCCATGCAGGAAGCAAACTCTCTAATCCACTAAAAAATATACATATAGGGAGAGGAACTTCCCTTCTGCAATGCCTGCTGGACTCATGGAATAAACAAAATGAACATGAAAGAAAAGGCTTCCATTTTATTGACACCACGAGTGAAGACCCTAATGATGAAGCATGTGGTGTCTGTGGGGATGGTGGAGACTTGATCTGTTGTGATAATTGCCCATCAACATTCCATCAAAGCTGCTTAAATATTAAAGAGTTCCCACCTGGCAACTGGCGCTGCATTTATTGTTGTTGTAAATTTTGTGAGTTGGTAGATGGAAATACAAATGAAAGAGATGGCTACGATGACTTTAATACATCTGCTTTACTTACATGCCGTTTATGCGATCAAAAATATCATAGATCTTGTGTTGAGGTAAATGGTGTCCAAGCTGACGACTCTAGTTTTGCATTCTATTGTGGATACAGATGTGAGGAGTTATCCAAGAGACTTGAAATGCTTCTTGGGGTTAAACATGACATTGAAGATGGACTTTCTTGGACTTTCGTTCGCCGGTCAGATGTTGGCCGTGATGCTTCTCAGATAGAATCTCAGATGGTTGAATGCAATTCCAAACTAGCTGTTGCATTATCTGTAATGGATGAGTGCTTCATGCCATATATTGATAATAGAAGTGGGATTAATCTCATCCACAGTATTCTTTATAGTTGTGGTTCAAATTTCAATCGCCTGAACTATTCTGGTTTTATTACTGCTATCCTGGAGAGAGGTGATGAAGTCATTGGTGCGGCGTCCATTAGGATCCGAGGGAATCAACTAGCAGAAATGCCATTCATTGGGACCCGTTATATGTATAGGCGCCAAGGAATGTGCCGCCGGCTTCTGAGTGCCATTGAATCGGCTCTTAGCTATTTAAATGTTGAGTTATTGGTCATACCAGCAGTCTCAGAAGTCAAAGATACTTGGACTTCTGTTTTTGGGTTTGAACCACTTGAAGTGACCAGGAAGCAAATGATAAAGAATTTCAATCTGTTGGTATTCCCTCATGTAGATATGTTAATGAAAGAGATAAAGAAGCCTAAAGTTGCTGATGAAGATCTGGTTCCTATAGAAGTTTCTAATCCTAAACTTCAGAAGAATCAAAGTACACTTGGGGAAGCAACTGACTGTGATGAGCCAAGTTCATTTAGGTCTGATTTAATCATTTCTGCCCCAGTGAATGATAGAGACGTAGTTGTTGAATCTGGTTCTCCTGATGAGACTGTGAGTCCTGATACAAGTCCAAAAGACGTAAAATGTGAAGTTGGATGCCAATCTGTTGGTGATAATTTGACAGTGGAAGGCATGACTACTGTAAAGGCAGATGATTATGATAGCGCGGCTCATTTAAAAGCTGAAGCGATAATCAATCATGATTGTGTCCAATCGCATCCCACTGGATCGAAAGAAATAAATTCTGAATCTATCAATGGCTGCGGTTCTCAGCAGAGACCCAGTGGTTATTGTACCTATGATGCTCTTGAGATCACTAAAGCTGATAAATCAGACGTGCGTATGGCAAAAGCAACCAATCTCCATAGTCTTGTACATTATGGAGATTGCCAAAGAGTTCAGATAGCTTATGGTTCCAGGGAGGATATCTCAAACGGTGTAAATGAGAAGAGTGAAGCAGCTTGCACAGTTGATGGGAAATCAGATGTTAGCGATAAGCCTGGCATAAATCGGTCTTCAGAGTTACCTGAGGTTGATTTACAGGTCAATCAAACTGGACAGGGTGACTCTCCATCATTGTGTGGCGGCTCAAGCACTGGTTCCGGCATGGCTCTGCACTGTGCATCAACCGGTGGTACTTCATGTGGTAATAGTACTGAAGTTATGGTTCTGTCCAAGGAAGCTGGTTGA 4257 0.4123 MEVPVLKGEDLAHKTEALNLTIQDNLVKPVVQQERVFDWDSNNNENIRLAENGSKSSLSCDDCVERVDIGMEVKKKDDLNDQVQIGGRVMSSVSEGADKISDDQEALNLTVENKDAEPTVQECDLDWYMSKGGNVGCVDDRSKMSSLSCDDSIRGVDIEVEVMKKDYLDDKMQISGGVLRSESKRAVSKISEGETTDNEEVKLNQQPCDLDLDVSKSGNVGLARTGIKRNTLRSGHCFEGLDIEMELKKKNNANDEVKTSGRVLRSMSKRIDNKIFHGGEADELLAGKNGENEHVWFEKNKVEAEKEERDYFVSSSYEKERVDVKMDGKERRKLKRKRGRPPKLKMEEQDQSVSNMQEKCGGPPKLKMEEQYQLVGTLQRKRGRPPKVKMEEQDQSVGNMQQKRGSPPKLKMEEQDQLVGNLHRKRGRPPKVKMEEQDQPGGHMQRKRGRPFKVKMEEQDQLPGKKKPWKRGRPPKNRQKINHLEVAQNRKRKKGFRKCKKGITVIDGTNMDAVDDMCLKMGSCVKESKKKRLTSTLTSNSANPLIKKKIGSNKAKQSVRQHILELLLAAGWVVDYRPRNGKEYNDAVYVSPNGRTHWSITLAYKRLQMHCEAGGGEGEVYIPGFKFVPIPFEEFNILTKVIKKRRKNKDKLKQTGGKDGGINMSLKGKVKRKISLVEEYNLDETSLKRFPALVNDRKRQKTHNKKQSVFMVRNAEEMDSETNGYVLYTGKRTVLAWMIDLGTVLQNERVHYVNHRRKGAKLEGRITMDGIHCDCCSEIVTMSEFEAHAGSKLSNPLKNIHIGRGTSLLQCLLDSWNKQNEHERKGFHFIDTTSEDPNDEACGVCGDGGDLICCDNCPSTFHQSCLNIKEFPPGNWRCIYCCCKFCELVDGNTNERDGYDDFNTSALLTCRLCDQKYHRSCVEVNGVQADDSSFAFYCGYRCEELSKRLEMLLGVKHDIEDGLSWTFVRRSDVGRDASQIESQMVECNSKLAVALSVMDECFMPYIDNRSGINLIHSILYSCGSNFNRLNYSGFITAILERGDEVIGAASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLSAIESALSYLNVELLVIPAVSEVKDTWTSVFGFEPLEVTRKQMIKNFNLLVFPHVDMLMKEIKKPKVADEDLVPIEVSNPKLQKNQSTLGEATDCDEPSSFRSDLIISAPVNDRDVVVESGSPDETVSPDTSPKDVKCEVGCQSVGDNLTVEGMTTVKADDYDSAAHLKAEAIINHDCVQSHPTGSKEINSESINGCGSQQRPSGYCTYDALEITKADKSDVRMAKATNLHSLVHYGDCQRVQIAYGSREDISNGVNEKSEAACTVDGKSDVSDKPGINRSSELPEVDLQVNQTGQGDSPSLCGGSSTGSGMALHCASTGGTSCGNSTEVMVLSKEAG 1418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1873 1418 CDD NAT_SF 1038 1097 - -
Alju01g1873 1418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 830 897 IPR013083 -
Alju01g1873 1418 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1029 1123 IPR016181 -
Alju01g1873 1418 PRINTS AT-hook-like domain signature 377 388 IPR017956 GO:0003677
Alju01g1873 1418 PRINTS AT-hook-like domain signature 421 431 IPR017956 GO:0003677
Alju01g1873 1418 PRINTS AT-hook-like domain signature 335 345 IPR017956 GO:0003677
Alju01g1873 1418 Pfam Tify domain binding domain 764 813 IPR032308 -
Alju01g1873 1418 SUPERFAMILY FYVE/PHD zinc finger 831 883 IPR011011 -
Alju01g1873 1418 MobiDBLite consensus disorder prediction 379 481 - -
Alju01g1873 1418 ProSiteProfiles Zinc finger PHD-type profile. 839 884 IPR019787 -
Alju01g1873 1418 MobiDBLite consensus disorder prediction 407 467 - -
Alju01g1873 1418 MobiDBLite consensus disorder prediction 328 366 - -
Alju01g1873 1418 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 982 1142 IPR000182 GO:0016747
Alju01g1873 1418 SMART PHD_3 841 882 IPR001965 -
Alju01g1873 1418 SMART PHD_3 883 943 IPR001965 -
Alju01g1873 1418 SMART AT_hook_2 335 347 IPR017956 GO:0003677
Alju01g1873 1418 SMART AT_hook_2 445 457 IPR017956 GO:0003677
Alju01g1873 1418 SMART AT_hook_2 423 435 IPR017956 GO:0003677
Alju01g1873 1418 SMART AT_hook_2 379 391 IPR017956 GO:0003677
Alju01g1873 1418 SMART AT_hook_2 468 480 IPR017956 GO:0003677
Alju01g1873 1418 PANTHER PHD FINGER PROTEIN 12 543 1278 IPR042163 GO:0003714|GO:0045892
Alju01g1873 1418 MobiDBLite consensus disorder prediction 1343 1363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1873 Alju-ChrAlju01 15267140 15276081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1873 378 1149 PHD Transcription Factor Family AT5G36670 39.975 0.0 590
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1873 01 15267140 15276081 Alju03g2881 03 54309757 54319080 CCT
Alju01g1873 01 15267140 15276081 Alju01g1873 01 15267140 15276081 ECH