Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1871 ATGCTCAATTCAATAGGACGAAATCTGAACCAGTGCTTCTCCAGGCTTATGCGGCCATTAATATCACCAGAAGATTCGTCTTCTTCCACCACCACCACCACTCTTCAAGATTCGTCTTCTTCTGTGTTCATAAAAAACTTCAACTCACTCTATGACACCACCTCCGATCACTCCGTCAATGCCGGCAGTGAGCCGGACTTAGCCACCGCCTTCGCCTCTCGGCGCTTCTTCTTCACCTCTCCCGGCCGCTCTAACTCCATCGTGGAATCCTCCGCCGCCGCTGGTGGTCAGAAAAAGACGGTCTTGGACAATAGCGTGGCTGTCCCTACCTTCTCGCCGGACCCCTATTTGGACTTCCGGCGATCCATGCAGGAGATGGTGGAGGCGCATCCAGAGCTGATGGATGTGAACTCCAACTGGGAAATCTTGCACGAGCTCCTTCTCTGTTATCTTGCTCTCAATCCCAAACACACCCACAAGTACATTGTGGGAGCTTTCGCCGATCTTCTCGTCAATCTCATGCCGTCGCCGCCGCCGACGTGGGTGCCACCTCATCCATAG 561 0.5365 MLNSIGRNLNQCFSRLMRPLISPEDSSSSTTTTTLQDSSSSVFIKNFNSLYDTTSDHSVNAGSEPDLATAFASRRFFFTSPGRSNSIVESSAAAGGQKKTVLDNSVAVPTFSPDPYLDFRRSMQEMVEAHPELMDVNSNWEILHELLLCYLALNPKHTHKYIVGAFADLLVNLMPSPPPTWVPPHP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1871 186 ProSiteProfiles OVATE domain profile. 108 172 IPR006458 -
Alju01g1871 186 Pfam Transcriptional repressor, ovate 112 173 IPR006458 -
Alju01g1871 186 NCBIfam uncharacterized plant-specific domain TIGR01568 106 174 IPR006458 -
Alju01g1871 186 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 173 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1871 Alju-ChrAlju01 15264715 15265275 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju01g1871 Ovate 5.8e-25 No_clan