Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1856 ATGGGAGTATTAAAGTTAACCCAAACTTCAAGGCGAAGGTCGATCGGAAGGGGTGTCATGGCCGCCGTGGAAGACGATGCGATGGAAAAATCTGACTCGAAAGATAAGATTTCTCCTTCAAAGGTGAAGGAGAGGAGCGCAATCTTCATCGATCGAGGAATATGCGTGAGAGCTGATAAGATTGATTTCAAGGATTGGGATAAACAGCTGGATAGGCACTTGAGTAAAGTCCTATCGAGAGCGTCTTCGGGGGAGAAGAAGGAAGACTGGGAAATCGATTACTCCAAATTGGACATAAGGCGTGCTATAGATCACGGAGCCTATGGAACAGTCTACCGTGGCGTTTATGACGGCCAAGACGTTGCCGTGAAAATATTTGATTGGAAGGACACCGATGCTGACGCAGCTGCTATTCGGGCATCGTTTCAGCAAGAGGTTGCTGCTTGGCATAAACTTAACCATCCAAATGTTACGAAGTTTGTTGGAGCTTCCCTTGGAAACTCGTATGTGAAAATTTCTTCTGAACAAACATCAGGGGAAGTTTATTCATTCATTCCGGCCCAGGCCTGTTGTGTTCTTGAGTTTGTTCCTGGGGGGACACTAAAGAAGCTTCTGATGAAGAACAGAAGGAAGAAACTTGATTTTGATGTTGCAATTAAACTTGCCTTGGACCTCTCCAGAGGTTTGAGTTATCTCCACACGAAAAAGATTGTGCACCGTGACGTGAAGACAGAAAATATTTTGTTGGATGAAAATGGAACTGCAAAAATTGCTGATTTTGGTGTTGCTCGAATTGAGGCTCTCAACCCATGTGAAATGACTGGGGGGGTTGGCACCCCTTGGTACATGGCGCCAGAGGTGCTTAAGGGTAAGCCTTACAACAAGAAATGCGATGTGTATAGTTTTGGGATATGCTTGTGGGAGATATATTGCTGTGACTTGCCTTATCCTACTCACAAGATTTCTCATGTATTTGCTGGAATTGGTCGACAGAATTTGCGACCAGAAATTCCAAGATGTTGCCCAAGTGCACTTGCAGGAATCATGAGAAGATGTTGGGATGAAGACCCGGATAAACGCCCCGAGATGGCCGAAGTAGTTAGAATGTTAGAGGCAATAGATGCAAGCAAGGGAGGACGCATGGTTCCAAAAGACCAGACTAGTTTTTGGTGTTTTTGTCCCGGGAGAGCCTTTTAA 1197 0.452 MGVLKLTQTSRRRSIGRGVMAAVEDDAMEKSDSKDKISPSKVKERSAIFIDRGICVRADKIDFKDWDKQLDRHLSKVLSRASSGEKKEDWEIDYSKLDIRRAIDHGAYGTVYRGVYDGQDVAVKIFDWKDTDADAAAIRASFQQEVAAWHKLNHPNVTKFVGASLGNSYVKISSEQTSGEVYSFIPAQACCVLEFVPGGTLKKLLMKNRRKKLDFDVAIKLALDLSRGLSYLHTKKIVHRDVKTENILLDENGTAKIADFGVARIEALNPCEMTGGVGTPWYMAPEVLKGKPYNKKCDVYSFGICLWEIYCCDLPYPTHKISHVFAGIGRQNLRPEIPRCCPSALAGIMRRCWDEDPDKRPEMAEVVRMLEAIDASKGGRMVPKDQTSFWCFCPGRAF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1856 398 PRINTS Tyrosine kinase catalytic domain signature 231 249 IPR001245 GO:0004672|GO:0006468
Alju01g1856 398 PRINTS Tyrosine kinase catalytic domain signature 297 319 IPR001245 GO:0004672|GO:0006468
Alju01g1856 398 PRINTS Tyrosine kinase catalytic domain signature 193 206 IPR001245 GO:0004672|GO:0006468
Alju01g1856 398 PRINTS Tyrosine kinase catalytic domain signature 341 363 IPR001245 GO:0004672|GO:0006468
Alju01g1856 398 ProSiteProfiles Protein kinase domain profile. 97 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1856 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Alju01g1856 398 CDD STKc_MAP3K-like 103 370 - -
Alju01g1856 398 SUPERFAMILY Protein kinase-like (PK-like) 85 370 IPR011009 -
Alju01g1856 398 Gene3D Transferase(Phosphotransferase) domain 1 198 387 - -
Alju01g1856 398 Pfam Protein tyrosine and serine/threonine kinase 98 370 IPR001245 GO:0004672|GO:0006468
Alju01g1856 398 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 376 - -
Alju01g1856 398 FunFam Kinase suppressor of Ras 1 86 177 - -
Alju01g1856 398 SMART serkin_6 97 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1856 398 Gene3D Phosphorylase Kinase; domain 1 86 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1856 Alju-ChrAlju01 15160309 15164328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1856 52 397 MAP Kinase Kinase Kinase AT3G22750 61.017 5.91e-161 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju01g1856 PK_Tyr_Ser-Thr 1.2e-57 CL0016