Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1833 ATGTTTCCTGCGGCTATGTCGTCCAATTCTACTGCTTCTTTGTCCGTAGAATCCTCTGTCTCTTCTGCTTCTAGACTTCACGACCTCTCTGGACTAAATCTCACAATTCCTCCTCAGCAGCCTCCAAAGATCAAGAAAAAGAGAAGCCTCCCAGGAAACCCAGACCCAGATGCAGAAGTGATAGCGTTATCTCCGAAGACGCTTTTGGCTACCAATAGGTTTGTGTGTGAGATCTGCAACAAGGGTTTCCAGAGAGATCAGAATCTTCAACTTCATAGGAGAGGCCATAACCTGCCATGGAAGCTGAAGCAAAGGAACAACAAAGAGGTTAAAAAGAGAGCCTACGTTTGTCCCGAGCCTACATGTGTTCATCACAATCCCTCGAGGGCTCTTGGGGACCTTACTGGAATTAAGAAACATTATTGCAGAAAACATGGAGAGAAGAAGTGGAAATGTGAGAAATGCTCAAAGATATATGCAGTTCAGTCAGATTGGAAAGCTCACACTAAAACCTGTGGAACTAGAGAATATAGATGTGACTGTGGAACTCTCTTCTCCAGGAAGGACAGCTTCATAACTCATAGAGCATTCTGTGATGCATTGGCAGAAGAAAGTGCAAGACTCTCAGCAAATCAACTAGCCTCAGCCACCACCAACCCACTGGTCCAGTCTCTCTTGCTATATCCAAACCAACACAGCTTCCTTAATAATCCATGGAACCCACCAATAACTCAAGAAAACCCTAACCCTAGCAACCTTCTCCAAGTGAAGCCCGAAGCTCAACATTTTCAGATGCCTCATTCGTTTCTTCAGGAACCTCCTCGTCTTCATCCTCACCACAAGAGCGCTCTGATAAATACACCCTTTCGGGGCCCACACATGGCCACGCAGTCTTCCTCAAACGCTGCCACGTCAGCCCACCTTTCTGCTACTGCACTCCTTCAAAAGGCTGCCACCGTCGGGGTCACTCAGATCATGCCCCAGCCATCTCATCAGTCTCAGACTCATCACCTGAGTCAGCTTAGCATGAGCGAGTTTGGTTCGGTGAACCAGCTCGACTCGGCGGTGCCTGACTATGTGAGAGGTTTTGCGACTCGGAATCTTAAGAATGATGATTTGACGAGGGACTTTTTGGGTTTAACCGACGAGGCCAACAACGGAGGCGACGGTGAGAACGGCGGTGGTGCGGTCAACCTGAAGAACGTCATGACGACGTTCACGGGGGACGAGTACGAGCACCACCATCACCACTCGCTCTTCAAGTCCCGACAAGGTTTCGGATTCGTTGGGACTTCAAATGCCCCCGAGACGTGGAGCAATTATTAA 1326 0.4864 MFPAAMSSNSTASLSVESSVSSASRLHDLSGLNLTIPPQQPPKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEVKKRAYVCPEPTCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHTKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQLASATTNPLVQSLLLYPNQHSFLNNPWNPPITQENPNPSNLLQVKPEAQHFQMPHSFLQEPPRLHPHHKSALINTPFRGPHMATQSSSNAATSAHLSATALLQKAATVGVTQIMPQPSHQSQTHHLSQLSMSEFGSVNQLDSAVPDYVRGFATRNLKNDDLTRDFLGLTDEANNGGDGENGGGAVNLKNVMTTFTGDEYEHHHHHSLFKSRQGFGFVGTSNAPETWSNY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1833 441 Gene3D Classic Zinc Finger 143 208 - -
Alju01g1833 441 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 96 IPR013087 -
Alju01g1833 441 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 24 400 IPR031140 -
Alju01g1833 441 FunFam protein indeterminate-domain 12-like 53 121 - -
Alju01g1833 441 SMART c2h2final6 74 96 IPR013087 -
Alju01g1833 441 SMART c2h2final6 150 170 IPR013087 -
Alju01g1833 441 SMART c2h2final6 115 145 IPR013087 -
Alju01g1833 441 Gene3D Classic Zinc Finger 54 122 - -
Alju01g1833 441 SUPERFAMILY beta-beta-alpha zinc fingers 73 170 IPR036236 -
Alju01g1833 441 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Alju01g1833 441 MobiDBLite consensus disorder prediction 31 58 - -
Alju01g1833 441 FunFam protein indeterminate-domain 5, chloroplastic-like 128 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1833 Alju-ChrAlju01 14925885 14929165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1833 1 430 IDZ Gene Family AT4G02670 49.119 2.28e-124 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju01g1833 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1833 01 14925885 14929165 Alju03g3227 03 56536608 56539444 CCT