Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1828 ATGAGTCAGAAAAAGAACCCTCTTGTGTTTCTAGACGTCTCAATTGATGGGGATCCTGTGGAAAGAATTGTTATCGAGCTTTTTGCCAGTATTGTTCCTAAGACAGCTGAAAATTTTCGGGCACTCTGCACAGGTGAGAAAGGCATTGGCAAATCAACTGGAAAGCCTTTGCATTACAGAGGAACCAGTTTCCATCGTTTAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCTGATGAAAATTTTATATTAAAGCATGATGGACCCGGTCTTCTGTCTATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTTAGTGGATTAGATCTTCTGAAGAAAATTGAACTGGTGGGGACACCAGATGGGAAACCTGTTCGGCCAGTTAAAATAATTGATTGCGGTGAAACCACTGAAGTGAAAATTCAGCCAAAAATTAGGAAAGAGAAAGGTGAAAAGAGAAAATCTGTTAAATCCTCAACTTCTGATGATAGTTCTGACAAAAAATCAAAAGGAAAAAGGAAGACATCTTCCAAGGATTTGAGGAAGAGGAGGAGATACTCAACATCTGATTCATACAGCTCAAACAGTGATAGCGACTCTGTTTCTTCAGACTCTGACTCAGATTCAGGGTCAGAATCATCGCTTTCTGACTCAAGTTCTTCCAGCTATGGTAAACATCGTAAGAGGAAACCTGTGAAAAGATCTAGGCACAAGCAGGGGAAGAAGAGGAGAAATGGACGAAAGCAAAAGAGAAGCCGGCATAATAGACAATCTAGACGCAAGTCCAGATGGAGCTCAGAAGATTCAAGTGATACTGAAAGTGATAGTACTAGTGGTAGTGACAGCAGTTCTGATGATGAGAAAGCTCATCGCCGTGTCTCTGTTCGTAAAGCACATGCTGAGAACAGACAGAAAAGAAATTTAGAAACCGGAAAGCAATCTCCCAGCCCTCCTTTATATAGAACTGCTTCAGATCGGGGAGAAGATTCCAAGGTCAGAAGAACTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCCGAGTTTCTGAATAATGGGCATGATACTGAAGCCAAATTTAGTAAAGCTGCTAAGCAACCCACTCATTTGGATGATTCTAATGACAATAGAGGTGCAAGTCCTAGAAGAAGTGATGCTATGAGTCCCGATAGGAAGTTAGTTGAGCAAAACCAAGGAGGTGCTTTGTTGACGAGTCCCCGCCAACCTGCTGCCTCCAAACATAGTCAGGGTTTATCAAAAAGCCCTTCACCAAATGGTGAACCAAAGCGTATTAGAAAAGGACGTGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTCACCCCATTCCTATCACCGTGGTGATAGAAATATAAGGAGGAACTTCGACAGGCGTACAAGCTACAGAAACTACCCTGAGCGTTCACCACAGAGACGCTATGGAAGCCCTCCAAGGTGCAGGAGCCGTCCGAGATACCAAAGCAGAAGAAGCCGGAGTCGGAGCATCTCTCACAGTCCAGTGCGTGGCCGTTTTAGGGACCATGGTCGCAGCCAGAGTCCAACACGTAGCCCCACTCCAGATGGCAGGCGACCTCCAATAAGTGATAGATTAAAATCTCGTCTTGGTCCTCAAAGTGTTCGGCACTCTCCAGACAGAGGAAGGGCCAGGTCCAATTCCAGGGATCATTTGTCTCCCCCTAGATCCCCCGATGCCACCCCACCTAGGCGTCATGATAAAAGGACTTCTGTATCTCCAAGCAGGTCTAGATCTAGTTCATCTGGACAGAAGGGATTAGTTTCCTATGGAGAGGCCAGTCCTGATTCTGGGGCAAGGTAG 1989 0.4495 MSQKKNPLVFLDVSIDGDPVERIVIELFASIVPKTAENFRALCTGEKGIGKSTGKPLHYRGTSFHRLIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVSGLDLLKKIELVGTPDGKPVRPVKIIDCGETTEVKIQPKIRKEKGEKRKSVKSSTSDDSSDKKSKGKRKTSSKDLRKRRRYSTSDSYSSNSDSDSVSSDSDSDSGSESSLSDSSSSSYGKHRKRKPVKRSRHKQGKKRRNGRKQKRSRHNRQSRRKSRWSSEDSSDTESDSTSGSDSSSDDEKAHRRVSVRKAHAENRQKRNLETGKQSPSPPLYRTASDRGEDSKVRRTEDKQSHEEGELSPENSEFLNNGHDTEAKFSKAAKQPTHLDDSNDNRGASPRRSDAMSPDRKLVEQNQGGALLTSPRQPAASKHSQGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRSPHSYHRGDRNIRRNFDRRTSYRNYPERSPQRRYGSPPRCRSRPRYQSRRSRSRSISHSPVRGRFRDHGRSQSPTRSPTPDGRRPPISDRLKSRLGPQSVRHSPDRGRARSNSRDHLSPPRSPDATPPRRHDKRTSVSPSRSRSSSSGQKGLVSYGEASPDSGAR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1828 662 Gene3D - 1 181 IPR029000 -
Alju01g1828 662 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Alju01g1828 662 MobiDBLite consensus disorder prediction 320 347 - -
Alju01g1828 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 MobiDBLite consensus disorder prediction 228 260 - -
Alju01g1828 662 CDD cyclophilin_ABH_like 7 173 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 401 433 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 441 466 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 180 212 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 540 556 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 264 299 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 636 650 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 580 614 - -
Alju01g1828 662 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Alju01g1828 662 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Alju01g1828 662 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Alju01g1828 662 MobiDBLite consensus disorder prediction 469 523 - -
Alju01g1828 662 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 363 387 - -
Alju01g1828 662 MobiDBLite consensus disorder prediction 180 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1828 Alju-ChrAlju01 14856038 14860649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1828 25 171 U-box Gene Family AT5G67530 48.322 4.58e-32 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1828 01 14856038 14860649 Alju01g1828 01 14856038 14860649 ECH