Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1818 ATGGTGAACCCAAAAAAGCATAGTGGTGGACAGACACTAGTGTTTGGGTTCGCGTCCAAACCTACTGAGCTTCTGGCGCTGATGCGGCTTCTTCAATCGATTGGATCGATCGACTTCCATCTCTTCAACGTCATCACTCTGAATCCTAACAATTGCACTATTTTCATACTAATGGCCGGCAGAGTTCAGATTCCTTCTCGAAATTCCGCGCTCATTGCAATGATTGCAGATGAGGATACTGTTGTTGGATTTTTGATGGCTGGGGTGGGCAATGTTGACTTGCGTAGGAAGACAAACTACCTTATTGTGGACTCAAAAACCACTGTCAAACAAATAGAAGATGCATTCAAAGAGTTCACAACAAGGGAAGATATTGCAATTGTGCTGATTAGCCAATATGTTGCAAACATGGTAAGGTTTCTAGTTGACAGCTACAACAAGCCTGTTCCTGCTATATTGGAGATTCCTTCTAAAGACCATCCTTATGATCCCGCCCATGATTCAGTTCTTTCGCGAGTGAAGTATTTATTCTCTGCTGAATCCGTGGCGTCTGGGAGACGTTAA 564 0.4362 MVNPKKHSGGQTLVFGFASKPTELLALMRLLQSIGSIDFHLFNVITLNPNNCTIFILMAGRVQIPSRNSALIAMIADEDTVVGFLMAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMVRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASGRR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1818 187 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 36 183 - -
Alju01g1818 187 Pfam ATP synthase (F/14-kDa) subunit 72 173 IPR008218 GO:0034220|GO:0046961
Alju01g1818 187 SUPERFAMILY AtpF-like 72 156 IPR036906 GO:0034220
Alju01g1818 187 Gene3D ATPase, V1 complex, subunit F 66 179 IPR036906 GO:0034220
Alju01g1818 187 FunFam V-type proton ATPase subunit F 66 179 - -
Alju01g1818 187 NCBIfam V-type ATPase subunit F 68 181 IPR005772 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1818 Alju-ChrAlju01 14762257 14766779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1818 58 183 Primary Pumps ATPases(2) AT4G02620 89.683 2.02e-83 241