Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1813 ATGGGGATGAATTTTGAGGGTGAACTCATGAATCTGAAGGACACAGAGCTGAGGTTGGGTTTGCCCGGAAGAGATGAGGAACAAGATAAACGTTCATGCAGCGTCGTCAGAAGCAACAAGAGGTGTCGGCCTGAATCAAGTGTGGAGGAGGGGTCATCGCTAACCCACAAGAACAACGCCGGTGACGGTTCTGACGACCAAGACCACGTGCCACCCCCAGCAAAGGCACAAGTAGTGGGATGGCCACCCATTCGATCTTACAGGAAGAATTGTAACAATAAGGGATGTCAAGAGGGTAGTGATGGAGCTGGATATGTGAAAGTGAGCATGGATGGTGCTCCTTATCTCAGGAAGATACATCTCAGGGTTTATAACAGCTATCCACAGCTCCTCAAGGCCTTGCAGAACATGTTCAAGTGCACTTTTGGTGAATACTCAGAAAGGGAGGGATACAATGGATCTGAATACGCTCCTACTTACCAAGACAAAGATGGCGACTGGATGCTGGTTGGAGATGTTCCATGGAATATGTTCATTTCATCTTGCAAGAGGTTGAGAATCATGAAAGGATCTGAGGCTAAAGGATTGGGTGGTTGTTTATGA 603 0.4743 MGMNFEGELMNLKDTELRLGLPGRDEEQDKRSCSVVRSNKRCRPESSVEEGSSLTHKNNAGDGSDDQDHVPPPAKAQVVGWPPIRSYRKNCNNKGCQEGSDGAGYVKVSMDGAPYLRKIHLRVYNSYPQLLKALQNMFKCTFGEYSEREGYNGSEYAPTYQDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEAKGLGGCL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1813 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 194 IPR003311 GO:0005634|GO:0006355
Alju01g1813 200 FunFam Auxin-responsive protein 98 199 - -
Alju01g1813 200 MobiDBLite consensus disorder prediction 18 47 - -
Alju01g1813 200 Gene3D - 98 199 - -
Alju01g1813 200 Pfam AUX/IAA family 15 197 IPR033389 -
Alju01g1813 200 SUPERFAMILY CAD & PB1 domains 98 189 - -
Alju01g1813 200 MobiDBLite consensus disorder prediction 1 78 - -
Alju01g1813 200 ProSiteProfiles PB1 domain profile. 103 190 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1813 Alju-ChrAlju01 14720424 14721358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1813 106 196 B3 DNA Binding Superfamily AT2G46530 37.363 2.58e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju01g1813 AUX_IAA 6.6e-57 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1813 01 14720424 14721358 Alju01g1813 01 14720424 14721358 ECH