Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1812 ATGGAAGTGATAGGTGTGAAGAAGGAGAAGATGGGTTTAGAGGAAACAGAACTGAGGCTGGGATTGCCCGGAAATAATGGCGGCGCCACCGAATCGGAAGTGGCTAGAAAGAGAGGTTTCTCTGAGACTGAATCAGAGACTACTGTGGATTTGATGTTGAATCTCTCTTCTTCAAAGGAATCAGCATATCCAAGTGATACCCTCAAGAAGGAGAAGACCCTCCTGCCCTCTGATCCTGCCAAGCCTCCCGCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGAGATCGTTCAGAAAGAACATATTGAAGAACAACATTGGAGAAGAGAAGGAGAAAGGAAGCCCTAATAATAATGGAAGCTTCGTGAAAGTAAGCATGGATGGAGCTCCTTACCTTCGCAAAGTGGACCTCAAGTTGTACAACACTTACCAAGATCTCTATGATGCTCTTGCCAAAATGTTCAGCTCCTTCACCATTGGTAACTGTGGATTCCAAGGAATGAAGGACTTTATGAATGAGAGTAAGCTGATGAATCTCTTGAACAGCTCCGACTATGTCCCAACCTATGAAGACAAGGACGGCGACTGGATGCTTGTCGGTGACGTCCCTTGGGAGATGTTTGTTGAATCATGCAAGCGTTTGCGTATCATGAAAGGGAAGGAGGCTATCGGACTTGCACCGAGGGCCATGGAGAAGTGCAAGAACAGAAGCTAG 714 0.4734 MEVIGVKKEKMGLEETELRLGLPGNNGGATESEVARKRGFSETESETTVDLMLNLSSSKESAYPSDTLKKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNILKNNIGEEKEKGSPNNNGSFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFSSFTIGNCGFQGMKDFMNESKLMNLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1812 237 Pfam AUX/IAA family 15 228 IPR033389 -
Alju01g1812 237 Gene3D - 114 231 - -
Alju01g1812 237 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 224 IPR003311 GO:0005634|GO:0006355
Alju01g1812 237 MobiDBLite consensus disorder prediction 19 88 - -
Alju01g1812 237 SUPERFAMILY CAD & PB1 domains 111 218 - -
Alju01g1812 237 MobiDBLite consensus disorder prediction 45 63 - -
Alju01g1812 237 FunFam Auxin-responsive protein 114 229 - -
Alju01g1812 237 ProSiteProfiles PB1 domain profile. 119 219 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1812 Alju-ChrAlju01 14707619 14709635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1812 101 222 B3 DNA Binding Superfamily AT3G61830 29.508 2.41e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju01g1812 AUX_IAA 3.7e-81 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1812 01 14707619 14709635 Alju01g1812 01 14707619 14709635 ECH