Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1803 ATGGCGAATCAGGTAGTCAAAGTGAAGAGGGAAACGATTACAGCATGCATGACCTGCCCACTCTGCAACAAGTTGTTCAAGGAGGCCACCACTATATCTGAATGCCTTCATACATTTTGCAGGAAATGCATCTATGAGAAAATAAATGATGAGGAACTGGAATGCTGCCCAATATGCAACATTGATTTGGGATGTGTTCCTCTCGAGAAATTAAGGCCAGACCACAGTTGGCAAGATGTAAGGGCTAAAATTTTCCCTTTGAAGAAAACAAAGGCAAAGGAACCAGAAGTTGTTCCGTCAGAACCATTACCAGCTAGAAGAAAGGAAAGATCACTTTCGTCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGTCCACCATGACAGGCAGAAGGACAAAGCCTACAAGAAAGGCTAGCGCTCAACGCTCCACTAGTTTTCCCATTGAGAAACCCATTATAAAAGAAGAAGGTTCAGTGGAAGATCATCCAGAGAGTTCAAGCTCCCCTGATACCTCCAACAAGGTTGCTCAGACTACTAGACAGAACTCGTCCCCTCATGATGCTAGCCAATCTGTTCCCAATAAGGAGAAAAATAATGGGGCTGAACCTTGGGAAGCAAAATTGGATCTTTGGAAACCTTTGAATTGTTTGGTGGAGGTTGCGAGTAGGAGTAAATCTTTCAAGTCCAACATGCAAGGAAGTGACGCTAAACAAGAACCTACTCAAATAAATGAGAGTGATTCTCAAGTACAAAAGTCCAAAATTAAGGACAACAGACGAAAGCCAAAGGTTGAGGATGAAAAGATTGGCACAGATCCTGCTTCTATTGACACTGCAAAAACCAATAAATTGCGCAGAATTCGCCGAAAAAAGGAACCTGTTTTGGGTGAATCAACTGTATCACCCCAAGCTGTGCTGGATGCAAACAGTGCTAAAATGAAAGAAAGAACTGCTCCAATATGGTTCTCCTTAGTAGCTTCTGAAGACCAGGACAGAGATGCGTCAAATGCGTCACTACCCCAAATTTCTGCTAGTTACTTAAGAATAAAGGATGGAAACATGCCAGTCTCGTATATCCAGAAGTACCTGATGAAGAAATTAGACCTGACCAATGAAGATGAGGTTGAGATTAAATGTATGGGACAACCAGTGGTCCTTACATTGCAGCTAAATAACTTGATCGACTTGTGGCTGCAAACAACATCAACATCACAGAGAATCCCAGCAGCCATTGGATCATCAGCTAAAGATTTTGTTATGGTCCTGACCTACGCTCGCAAGGCAGCAGCCCCGCCTCCTTGA 1305 0.4322 MANQVVKVKRETITACMTCPLCNKLFKEATTISECLHTFCRKCIYEKINDEELECCPICNIDLGCVPLEKLRPDHSWQDVRAKIFPLKKTKAKEPEVVPSEPLPARRKERSLSSLVVSTPRVSTQSTMTGRRTKPTRKASAQRSTSFPIEKPIIKEEGSVEDHPESSSSPDTSNKVAQTTRQNSSPHDASQSVPNKEKNNGAEPWEAKLDLWKPLNCLVEVASRSKSFKSNMQGSDAKQEPTQINESDSQVQKSKIKDNRRKPKVEDEKIGTDPASIDTAKTNKLRRIRRKKEPVLGESTVSPQAVLDANSAKMKERTAPIWFSLVASEDQDRDASNASLPQISASYLRIKDGNMPVSYIQKYLMKKLDLTNEDEVEIKCMGQPVVLTLQLNNLIDLWLQTTSTSQRIPAAIGSSAKDFVMVLTYARKAAAPPP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1803 434 MobiDBLite consensus disorder prediction 165 198 - -
Alju01g1803 434 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Alju01g1803 434 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Alju01g1803 434 MobiDBLite consensus disorder prediction 226 250 - -
Alju01g1803 434 SMART ring_2 19 59 IPR001841 -
Alju01g1803 434 MobiDBLite consensus disorder prediction 91 108 - -
Alju01g1803 434 MobiDBLite consensus disorder prediction 112 147 - -
Alju01g1803 434 MobiDBLite consensus disorder prediction 251 274 - -
Alju01g1803 434 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Alju01g1803 434 MobiDBLite consensus disorder prediction 91 201 - -
Alju01g1803 434 SUPERFAMILY RING/U-box 13 80 - -
Alju01g1803 434 MobiDBLite consensus disorder prediction 226 276 - -
Alju01g1803 434 CDD RING-HC_PCGF 17 60 - -
Alju01g1803 434 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 430 IPR044807 GO:0004842
Alju01g1803 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 116 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1803 Alju-ChrAlju01 14634827 14640131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1803 2 351 C3H Transcription Factor Family AT2G30580 51.852 6.33e-108 320
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1803 01 14634827 14640131 Alju03g2837 03 53993839 53999253 CCT
Alju01g1803 01 14634827 14640131 Alju01g1803 01 14634827 14640131 ECH