Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1801 ATGGTGGGAGAATCTAGGGTTTTGTCTTCTTCTCTTTCGCCTTTTAGGCAGATAGAAGCTAAAATGGAAGAGGTTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAAGGTTCTTAGTTTGTTGTCTCATCCCCGAGATCAAGTTCAGCATAGGAACTTAATGGTACAAACTGGGGAGGCTGTGGGGAAGTTCAAGAAAGTTGTTTCTCTGCTCAGTAACGGTTTGGGTCATGCAAGAGTCAGGAAACTCAAAAGACTTCAAATTCCTATTCCTCAAAGCGCGCTCTTAGACAACCCTAATTGCAGAACAAATTATCAAACAAAAAATTTGCTCCTTCCCCAAAACAGCTTTAGGGACGAGTCGATTCAGGAATTGAGAAATTCACTCTCCCTGGGAAATCCATCATTGGAATTGAGCTCAAGTTGGAAAAGTCCTCTCCAACTTACCCAACAAGCATCTTCACAGCACTATCACTTCCTTCAGCAGCAGCAACAAAGGTTATTGCTCCAGCATCATCAACAACAGATGAAACACCAAGCAGATTTGATGTATCAAAGGAACAATAGTGGCATAAATCTGAATTTTGATAGCTCTAGCTGTACACCTACAATGTCATCAACTAGGTCTTTTATTTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACATGGATGGAAGTGCCTTTCATTTAATTGGTGCTCCTCTCTCTTCAGATCAGAATTCACTACAGCATAAAAGAAAGTGTTCTGGCAGAGATGAGGGCAGCGTCAAGTGTGGGAGCAGCAGTACCAGATGCCACTGCTCAAAGAAGAGGAAACACAGAGTAAAGAGATCAATCAAGGTTCCTGCTATCAGCAACAAGCTTGCTGATATACCCCCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGTTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGACTCTTCCATGCTAATTGTTACCTATGAAGGCGAGCATAACCACCCTAAAATACCAACACAATCCACAAATGCATGA 1089 0.4307 MVGESRVLSSSLSPFRQIEAKMEEVEEANRAAVESCHKVLSLLSHPRDQVQHRNLMVQTGEAVGKFKKVVSLLSNGLGHARVRKLKRLQIPIPQSALLDNPNCRTNYQTKNLLLPQNSFRDESIQELRNSLSLGNPSLELSSSWKSPLQLTQQASSQHYHFLQQQQQRLLLQHHQQQMKHQADLMYQRNNSGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPLSSDQNSLQHKRKCSGRDEGSVKCGSSSTRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDSSMLIVTYEGEHNHPKIPTQSTNA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1801 362 SMART WRKY_cls 294 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1801 362 Coils Coil 15 35 - -
Alju01g1801 362 ProSiteProfiles WRKY domain profile. 289 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1801 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 360 IPR044810 GO:0003700
Alju01g1801 362 SUPERFAMILY WRKY DNA-binding domain 292 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g1801 362 Pfam WRKY DNA -binding domain 296 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1801 362 Gene3D WRKY domain 282 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g1801 362 FunFam WRKY transcription factor 65 278 355 - -
Alju01g1801 362 Pfam Plant zinc cluster domain 247 292 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1801 Alju-ChrAlju01 14618527 14620793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1801 22 359 WRKY Transcription Factor Family AT2G30590 55.937 2.90e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju01g1801 WRKY 4.4e-26 CL0274