Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1795 ATGTGCGCTCTCGTCCTTTCGAAACCTAGTTCTGCTGAGCTGAGAGCCTCCATATCCAAACGCCATTTAACCCTCCGCGCACAGACCTCGAATCCCGCAATTATAGTTGGGATGTCTGGGGAAGGCTTTGATGGACAGGATGCGGGCTATGTACCTGAGAACCCCAATTTTCCACAAAATCATTCTGATGAAAATGATGCAGGAGTGATTGATAATACAGGATTTCCTGAACAAGAGTCTGTAGAACATGATACGGGCAATGTAGTTGAGGAATACAATCCTCCAGACAATCATTTGGATGGAGTTGATGCTGGAGATTTGCCAAAAAATTCCGAATCTCCTCAAAAGCATATTGATGAACATCATGATGTAGGAGATATACCTGAGAGTTTTGATTCTCAGAAGCAGGAACATGACTTAGATTCAAAAGGAACTGAAATAAAACGGTGGCCTGGTTGGCCTGGAGAGAATGTATTCAGAATGTTGGTTCCTGTTCAGAAGGTTGGCAGTATTATTGGCCGCAAGGGGGAATTTATTAAGAAGATTACCGAAGAGACAAAAGCTCGTATTAAAATACTTGATGGTCCCCCTGGAACCTCAGAAAGAGCTGTAATGGTATCTGCAAAAGAGGAGCCAGATCGCACCATACCACCTGCAGTTGATGGCTTGTTAAGGGTTCATAAACAAATTGTCAATGTTGACCGTGATCCTGCTGATAGCACATCTGTTGCTGGGCGCTCAATTGTTACAAGACTTCTTGTTGCTGATACTCAAGCAGGAAGCTTGATTGGGAAGCAGGGGTCTACTATAAAATCCATTCAAGATACATCTGGTTGTACCATACGAGTCCTTGGATCAGAGCACCTGCCAGTTTTTGCTCTGCGAGATGATAGTGTTGTTGAAATACAAGGCGAATCTTCTGGAGTTCACAAGGCAGTTGAACTAATTGCAACTCATCTAAGAAAATTCTTGGTAGACCGGAGCATAGTTGGAGTATTTGAAACACAGATGCAATCACCAGACGTTCGAGCCAACCAGAATGTGCCACCACACCAGCCATGGGGTCCTCCTCCTCAAGGATTTCCAGCTCCTGCAGCTGGTGGACCTCCATTTGCTCCTAACCCGCAATATATGCCACCTTCACATCACTACGATAACTATTACCCACCTGCTGATCTGCCTCCTATTGATAAGCACCTTCATCAGGGACCACCGGCCTATGGAAGGGATGCTTCTATGGTGCCCAGTGCGCAACCACAACAATCTGTTGTGACCAAGGTTACACAGCATATGCAAATTCCTCTGTCCTATGCAGATGCAGTGATTGGAACATCAGGTGCAAACATCAGCTACATTCGGCGTGCTAGTGGAGCAAGTATTACAATTCAGGAGACAAGGGGTGTGCCAGGGGAGATGACTGTTGAAATAAGTGGGACTGCTTCACAAATACAGACTGCTCAACAGCTGGTTCAGAATTTCATGGCTGAAGCTGCAAGCACGGCACAGGATCAGATGGGGGGATCAGCAGTTGGGCAAGGTTACAATTCGTATCCTGCAAATGCTCCTGTGTATGCATCTCCACCCTCAAGCGCTGGTGGCCATACAGGCCACGTCCCTGCTGCGGATTATGGTCCTGTATACGGCACCAATTATGGCTATTGA 1662 0.4627 MCALVLSKPSSAELRASISKRHLTLRAQTSNPAIIVGMSGEGFDGQDAGYVPENPNFPQNHSDENDAGVIDNTGFPEQESVEHDTGNVVEEYNPPDNHLDGVDAGDLPKNSESPQKHIDEHHDVGDIPESFDSQKQEHDLDSKGTEIKRWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGTSERAVMVSAKEEPDRTIPPAVDGLLRVHKQIVNVDRDPADSTSVAGRSIVTRLLVADTQAGSLIGKQGSTIKSIQDTSGCTIRVLGSEHLPVFALRDDSVVEIQGESSGVHKAVELIATHLRKFLVDRSIVGVFETQMQSPDVRANQNVPPHQPWGPPPQGFPAPAAGGPPFAPNPQYMPPSHHYDNYYPPADLPPIDKHLHQGPPAYGRDASMVPSAQPQQSVVTKVTQHMQIPLSYADAVIGTSGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQTAQQLVQNFMAEAASTAQDQMGGSAVGQGYNSYPANAPVYASPPSSAGGHTGHVPAADYGPVYGTNYGY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1795 553 CDD KH-I_PEPPER_rpt2_like 249 321 - -
Alju01g1795 553 MobiDBLite consensus disorder prediction 341 383 - -
Alju01g1795 553 ProSiteProfiles Type-1 KH domain profile. 426 490 - -
Alju01g1795 553 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 151 210 IPR036612 GO:0003723
Alju01g1795 553 ProSiteProfiles Type-1 KH domain profile. 156 223 - -
Alju01g1795 553 SMART kh_6 155 235 IPR004087 GO:0003676
Alju01g1795 553 SMART kh_6 425 495 IPR004087 GO:0003676
Alju01g1795 553 SMART kh_6 246 321 IPR004087 GO:0003676
Alju01g1795 553 Gene3D - 156 326 - -
Alju01g1795 553 MobiDBLite consensus disorder prediction 58 143 - -
Alju01g1795 553 MobiDBLite consensus disorder prediction 102 143 - -
Alju01g1795 553 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 416 497 IPR036612 GO:0003723
Alju01g1795 553 MobiDBLite consensus disorder prediction 350 377 - -
Alju01g1795 553 Pfam KH domain 250 317 IPR004088 GO:0003723
Alju01g1795 553 Pfam KH domain 159 211 IPR004088 GO:0003723
Alju01g1795 553 Pfam KH domain 428 491 IPR004088 GO:0003723
Alju01g1795 553 ProSiteProfiles Type-1 KH domain profile. 247 316 - -
Alju01g1795 553 CDD KH-I_PEPPER_like_rpt3 426 494 - -
Alju01g1795 553 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 148 513 - -
Alju01g1795 553 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 246 330 IPR036612 GO:0003723
Alju01g1795 553 CDD KH-I_PEPPER_rpt1_like 156 224 - -
Alju01g1795 553 Gene3D K Homology domain, type 1 415 503 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1795 Alju-ChrAlju01 14578216 14585363 Dispersed