Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1785 ATGGAGTTCAGGTACACAGAAGAGTCAAAGAGCTGGAGCGAAGAAATTGGTGATGATCGATCGGAGCCTAATGAAGAAAGGGGAATTAGTACAGGAAGATCATACGAGTGTGTGTTTTGCAGGAGAGGGTTCACCACAGCACAGGCCCTTGGTGGCCACATGAATATTCACAGGAAAGATAGAGCCAAGTCCACCAAACCCAGTTTTTCTGCTTCCACTTCAACCAAAATGATTGAAGACCACGAGATCGACCATGCAATTTCAAGTTTCCCACCTGGGAATTACTTTTCTTCTGAGGTAGATAACAACAGCAATCATAATTATAATTACCCTTCCTCCCAATTTGCTTTTCCTGCAGAACAGTACTGTGATCAAAGGGATCGGGACGTGTTTGGTGGAGATTATAATTGGGTGACGGGTTTGAGTTTGTCTAATCCACTTTATGTGAGCAATAATAGAGAGAAGATAAGAAGTAGCAGTGAAGAAGATGGTCTGGATTTGGAGCTTCGATTGGGTTATCATTCCTAA 528 0.428 MEFRYTEESKSWSEEIGDDRSEPNEERGISTGRSYECVFCRRGFTTAQALGGHMNIHRKDRAKSTKPSFSASTSTKMIEDHEIDHAISSFPPGNYFSSEVDNNSNHNYNYPSSQFAFPAEQYCDQRDRDVFGGDYNWVTGLSLSNPLYVSNNREKIRSSSEEDGLDLELRLGYHS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1785 175 PANTHER OS07G0101800 PROTEIN 6 174 - -
Alju01g1785 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Alju01g1785 175 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Alju01g1785 175 MobiDBLite consensus disorder prediction 1 28 - -
Alju01g1785 175 Gene3D Classic Zinc Finger 18 89 - -
Alju01g1785 175 SUPERFAMILY beta-beta-alpha zinc fingers 33 61 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1785 Alju-ChrAlju01 14459399 14459926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1785 35 108 C2H2 Transcription Factor Family AT5G43540 43.243 7.91e-14 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju01g1785 None None None