Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1779 ATGTTAATTCCTATCGTTTGGTTAATGCTTGTTGAGCTGACGGTTCCTTTGGTGAGATGGCAAGGGAAGCCATTTCTCACTGTCAAGTATGACGTTACTGTTTCCACGGATGATATACAGATTCATGAGATGGATTTATTATGCTTGCCGCAAAGGTCAACCGACAAGAAATTGAAATTGAAGCCGTCCCAGAGAATGATGGCTGGCAAAGCAAGGCGAGAAACCAACTTTGCCCGTGTGCTTCAACTTTCTCTTTTCTTTATGGCTTGTACTGGAAGTAACACTAGTGGAGGCTCCTCTGGGTCTCCTTGCGGGGCATGCAAGTTCCTGAGAAGGAAGTGTGCGTCTGATTGTATATTTGCTCCTTATTTCTGCTCTGAACAAGGCCCTTCTAGTTTTGCTGCCATACATAAGGTTTTTGGAGCTAGTAATGTTTCTAAGCTGCTCTTGAACTTGCCTCCTCATGATCGTTGTGAGGCTGTCCTCACAATTGCCTATGAGGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTCTCCCACATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAGTTGATGCAAGCCAAGGCACAGTTAGCTCAGAAGAGCATAGAGAATAATGAAGATTACTGGGGAAGGAATATTAATAATGCTTATGGGCAAACAATATTGAATCCAATCTATAGCACTAATAATTACACCAACATGAACCCTATTTCTCCTCAGAGTTCTCTTGACTCTATTGATTACTCTACTATCCATGATGGCTCATCTTCCATGAGTTTGCAACAGGAGGGTTTCTCTTTCTACCAGCAACCTCGCTCCAAGAAAAGTCCATCTTATGATAGCAATGACTTGAGCGAGCTTCATGAGCTAGCTCTCAGAATGATGAGAAATTAG 915 0.4339 MLIPIVWLMLVELTVPLVRWQGKPFLTVKYDVTVSTDDIQIHEMDLLCLPQRSTDKKLKLKPSQRMMAGKARRETNFARVLQLSLFFMACTGSNTSGGSSGSPCGACKFLRRKCASDCIFAPYFCSEQGPSSFAAIHKVFGASNVSKLLLNLPPHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKSIENNEDYWGRNINNAYGQTILNPIYSTNNYTNMNPISPQSSLDSIDYSTIHDGSSSMSLQQEGFSFYQQPRSKKSPSYDSNDLSELHELALRMMRN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1779 304 Coils Coil 183 210 - -
Alju01g1779 304 PANTHER LOB DOMAIN CONTAINING PROTEIN 99 266 - -
Alju01g1779 304 Pfam Lateral organ boundaries (LOB) domain 103 201 IPR004883 -
Alju01g1779 304 ProSiteProfiles LOB domain profile. 102 204 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1779 Alju-ChrAlju01 14406720 14409830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1779 88 304 AS2 family AT2G42430 54.878 5.00e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju01g1779 LOB 9.7e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1779 01 14406720 14409830 Alju01g1779 01 14406720 14409830 ECH