Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1778 ATGAAAGGTTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGCTGTGTTTTTGCACCTTACTTCTGCGATGAACAAGGAGCTACTCATTTTGCAGCCATTCACAAGGTTTTTGGTGCAAGTAACGTCTCTAAGCTTCTTGCTCATCTCCCTGTAAGTGACCGTTGTGAAGCTGCAGTTACCATCTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATTTATGGCTGTGTTTCCCATATCTTCGCCCTCCAACAACAGGTGGTTAATTTACAAGCACAGCTAGCTTATTTGAAGGAACAAGCTGCTCAGAGCAATATTATGAATCCCTCTGTCCCTGAAAACCCTAATAAGCCAGCCGCTTTTTTCTCTGATCATGATCTTCAAAAGTGGTTTCAGGCTGAGAATTCAAACACAGGAGGGACTCAATTTTTTCCCAGCTCGTCTGATATGAATTCTTTTGCAACGCAGTGCTATGGAAATTATATGACTAGTTCCTTTGTGAATCCAAACCCTATTACTGGGGATTATAAAAACTCAGGAACCAATATGGAAGAAAGTACTTCATTTTCGAGCTTTCATGGTCTGGATCAGACCAATTGTAACTCGGTGTCTTTTGACAATATGCAAGCAAGCAGTAGTAGGCAGTGGGGCTTTCTTGAAGTGGATGATCTTCAATCTGTGGCTTTTGGTTACAGTGGATGA 723 0.4232 MKGSGSPCGACKFLRRKCVRGCVFAPYFCDEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSNIMNPSVPENPNKPAAFFSDHDLQKWFQAENSNTGGTQFFPSSSDMNSFATQCYGNYMTSSFVNPNPITGDYKNSGTNMEESTSFSSFHGLDQTNCNSVSFDNMQASSSRQWGFLEVDDLQSVAFGYSG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1778 240 Coils Coil 87 107 - -
Alju01g1778 240 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Alju01g1778 240 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Alju01g1778 240 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1778 Alju-ChrAlju01 14395702 14396523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1778 7 123 AS2 family AT3G58190 83.898 8.56e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju01g1778 LOB 4.7e-36 No_clan