Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1770 ATGAGCTCCTCTGAGGCCAAGTCTTTGCCCTTTAAGTCTAAGAAGCCCCATATCTGTCATACAGCCTCCAAATCCCAATCACCAGATCCCATTTCATTGAACTCCAAAACGCCTGAGAAGGCGTCACAGCTCTCACGCCGTACCCGAAACCGCGGTTTTGCTCTCTCCATTAGAGAAGTCAGGAAAGTCGCTGAAAGCCTCCAAGAACAGAAAGGCCAGCGACAAAATCATGATCGTACGGAGCATATAAAGTCCGCTCGAAGGAAGATTGCACCTTCTTTCGGCAAAATCTCCCCTCGCAAATCCAAGGCACCTATGGATGAGCCCGTCAAGCTGCCGGAGAAGTATGAAATTTTGGGTGAGTTCTTTGATAGCTTGGATAGCTCGATCCGATTGTTGTATTTGAAAGGTTCCTCAACAACTTTCACGAATGTCTACCCCAAAATTGAATGTTTAACTGATAGGAGATTTACGCATAGTCATCTGGCCCAGTTGAAATATATCTTTCCCGAGGCGCTTGTTGTAAAGAAGGTGCTCAGGTTTGATGAACGAACAAGTTGTATGAAGCCAGACCTCCATCTTACATTAAATCCCGATTCAAAGTTGTTTTCTGAAGGTGGAAGCGTGTCCTTGCGAAAGTTATTTCGCACACGGTTAAGAGATTTTTATGAATCACATCCTGAGGTTGATGAAATTCCAGAAGAAATACTGCCTGAGCCATTCAATAACCGTAAGCAAGATCGTCCTTTGGAAACATTGGGAACTGCCTCCTCATCATTTGCTACAATACCATCAAATGATGCAGTTGCACCTCATCTTCGAGCTGCAGAACCTATATGCATGCAAGATAATGCCATGGTAATCAATTCAGAGCCTGCTGAGGGGGAAGGAAACTTGCCAGGACCTGTTAACAGGTCAATAGAAGCACATCATCAACAACCAGCAGTAGCCACTCATATGTCTCGATCTTTTAGAAGGCGCTTTTCTCAGAAATCTGAAAAAGATGAAGCAAATGATGTGCAACAAAAGTCACCATCAGGCTCATTACCTCCTCAATCTGTCCCAGTTTCAGAATCAAGCATGAAGATAAATTCATCAAGTGTAGATACTGCTATGTGCCCAACCATATGTGCTTCTCCAGCTAATCTTAAATCATCCAGTGTTTCAGTTGCCACTCCAAATAAAGTTGTGTCTACTCCATCTAGATTGATGACTCATACACCTTCATTGACTACCCCTAAGAGATGTTACATGAGCCCCGATGACAGCCCTTGCAGCTCATCAAACAAGTTGGTTGGGCGTGCAACTAGTTTGAAGAAGTCATTGAACTTTGACACTCCGGTTAAAAATCGCACGACAGAGAATGAAGCTGATGATGCTGGTGGCTTATCATCTGATGACGATATTTTTGATATTCTACCGGAGAGTCTTCTCCAATCGATTAAAGAAAAAGAGATAGTGGCGATGGAGGAAAGAAATCCGGCTATCTCACAAGCAAAAAGACGGCAAAAAATGATCGCCTGCCTGCCTAAGCTATTTAACATGATTCATCTCTTGATTCATTCAATGAATCGTTCTGTCGTCACAAAAGAGGAGCTTCTAAGCAAGATAATCTCAAACCACTGTGATACTGTTGACCGGAGAGAAGTTGAAGAACAGCTGAATTTGTTGCTAGAACTAGTTCCAGAATGGATCTCTGAAAAGTTGGCATCTAGTGGAGATCTGCTATTCTGCATAAATAAAATGCAGGACCCTGAGACCATTCGATCGCAGCTTGCAGAAGCAAAGTGA 1791 0.4327 MSSSEAKSLPFKSKKPHICHTASKSQSPDPISLNSKTPEKASQLSRRTRNRGFALSIREVRKVAESLQEQKGQRQNHDRTEHIKSARRKIAPSFGKISPRKSKAPMDEPVKLPEKYEILGEFFDSLDSSIRLLYLKGSSTTFTNVYPKIECLTDRRFTHSHLAQLKYIFPEALVVKKVLRFDERTSCMKPDLHLTLNPDSKLFSEGGSVSLRKLFRTRLRDFYESHPEVDEIPEEILPEPFNNRKQDRPLETLGTASSSFATIPSNDAVAPHLRAAEPICMQDNAMVINSEPAEGEGNLPGPVNRSIEAHHQQPAVATHMSRSFRRRFSQKSEKDEANDVQQKSPSGSLPPQSVPVSESSMKINSSSVDTAMCPTICASPANLKSSSVSVATPNKVVSTPSRLMTHTPSLTTPKRCYMSPDDSPCSSSNKLVGRATSLKKSLNFDTPVKNRTTENEADDAGGLSSDDDIFDILPESLLQSIKEKEIVAMEERNPAISQAKRRQKMIACLPKLFNMIHLLIHSMNRSVVTKEELLSKIISNHCDTVDRREVEEQLNLLLELVPEWISEKLASSGDLLFCINKMQDPETIRSQLAEAK 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1770 596 MobiDBLite consensus disorder prediction 400 422 - -
Alju01g1770 596 FunFam CDT1-like protein a chloroplastic 466 596 - -
Alju01g1770 596 Pfam DNA replication factor Cdt1 C-terminal domain 476 568 IPR032054 -
Alju01g1770 596 MobiDBLite consensus disorder prediction 444 466 - -
Alju01g1770 596 MobiDBLite consensus disorder prediction 341 363 - -
Alju01g1770 596 Pfam DNA replication factor CDT1 like 112 198 IPR014939 -
Alju01g1770 596 PANTHER DNA REPLICATION FACTOR CDT1 20 596 IPR045173 GO:0003677|GO:0030174|GO:0071163
Alju01g1770 596 SMART CDT1_2 112 239 IPR014939 -
Alju01g1770 596 CDD Cdt1_c 472 593 IPR032054 -
Alju01g1770 596 Gene3D - 465 596 IPR038090 -
Alju01g1770 596 MobiDBLite consensus disorder prediction 326 340 - -
Alju01g1770 596 CDD Cdt1_m 98 250 IPR014939 -
Alju01g1770 596 MobiDBLite consensus disorder prediction 1 50 - -
Alju01g1770 596 SUPERFAMILY "Winged helix" DNA-binding domain 107 241 IPR036390 -
Alju01g1770 596 MobiDBLite consensus disorder prediction 20 41 - -
Alju01g1770 596 MobiDBLite consensus disorder prediction 310 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1770 6 594 Core DNA Replication Machinery Family AT2G31270 41.612 9.30e-112 344
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1770 01 14346414 14349352 Alju03g2812 03 53776603 53782063 CCT
Alju01g1770 01 14346414 14349352 Alju01g1770 01 14346414 14349352 ECH