Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1760 ATGACATACCTAGCCAATATGTCTTGTCCATCCTATCAGCAGCCATGCCCGGATTGGGAGTTTTGGCAGGAGACCTCTGATCCTTTCTTGGTCTCTTCATCAAGCGACCAAATTCATGCAGACCCTTTTCATGATTATCTTTGCTTCGATATGATTGACAGGGAAGCAAATCAAGTGCCAGTGAGTTGGGAAGACATGGAAGCAAAGAAGACTGTGGAGGAAAAAACATACATAGGCGTGAGGAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACAAGGAATGGGACCAGAGTTTGGCTGGGAACGTTCGAGAGTGCAGAGGAGGCTGCTTTAGCTTACGACCAAGCTGCATTCACCATGAGAGGCAACAACGCTGTTCTTAATTTTCCAGTCCAAAAGGTGAAGGACTCTCTGCAACACATCATGTATGGTTGCCGCAAAGGCTGTTCGCCTGCTTTAGCACTCAAAGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGTTAAGAAAGGCAAAGCCAAACGGCAACCGGAGGTGGTGGTGCTAGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCACCATATCTGATCAGACTACAAGCTAG 624 0.4712 MTYLANMSCPSYQQPCPDWEFWQETSDPFLVSSSSDQIHADPFHDYLCFDMIDREANQVPVSWEDMEAKKTVEEKTYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFESAEEAALAYDQAAFTMRGNNAVLNFPVQKVKDSLQHIMYGCRKGCSPALALKERHYIQRKLSSKVKKGKAKRQPEVVVLEDLGVEYLEQLLTISDQTTS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1760 207 ProSiteProfiles AP2/ERF domain profile. 76 134 IPR001471 GO:0003700|GO:0006355
Alju01g1760 207 Pfam AP2 domain 77 126 IPR001471 GO:0003700|GO:0006355
Alju01g1760 207 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Alju01g1760 207 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Alju01g1760 207 FunFam Ethylene-responsive transcription factor 2 75 136 - -
Alju01g1760 207 Gene3D AP2/ERF domain 75 136 IPR036955 GO:0003700|GO:0006355
Alju01g1760 207 SMART rav1_2 76 140 IPR001471 GO:0003700|GO:0006355
Alju01g1760 207 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Alju01g1760 207 CDD AP2 77 136 IPR001471 GO:0003700|GO:0006355
Alju01g1760 207 PANTHER DNA-BINDING DOMAIN 66 200 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1760 Alju-ChrAlju01 14246078 14246701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1760 52 205 AP2-EREBP Transcription Factor Family AT3G23240 52.830 4.95e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1760 AP2 1.3e-14 CL0081