Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1758 ATGTCTTGTTCGTCAACGCAGCAGCCATTCCCAGATTGGGAGTTTTGGCAGCAGGAGGCCTCTGATCCTTTCTTGGTCTCTTCATCAAGCGACCAAATTCATGCAGACCCTTTCCATGATCATCTTTGCTTCGATATGGTTGACAGGGAGGCAAATCAAGCGCGGGTGAGTTGGGAAGACATCGGAGCAGAGAAGACTGCTGAGGAGGAAAAAACATACATAGGGGTGAGAAAGAGACCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACCACCAGGAATGGTAACAGAGTTTGGCTGGGAACGTTTGAGAGTGCAGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCGCCATGAGAGGCAACAACGCAGTTCTTAATTTTCCAGTGCAAAAGGTGAAGGACTCTCTGCAACACATCCAATATGGTTGCCGCGAAGGGTGTTCGCCGGCTTTAGCCCTAAAGGAGAGGCACTACATCCAAAGAAAACTGTCGTCAAAGGCTAAGAAAGGCAAAACCAAACAGAAATCATCAGAGGTGGTGGTGCTTGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCACCCTCTCTGATCAAACTACAAGCTAG 615 0.4829 MSCSSTQQPFPDWEFWQQEASDPFLVSSSSDQIHADPFHDHLCFDMVDREANQARVSWEDIGAEKTAEEEKTYIGVRKRPWGKFAAEIRDTTRNGNRVWLGTFESAEEAALAYDQAAFAMRGNNAVLNFPVQKVKDSLQHIQYGCREGCSPALALKERHYIQRKLSSKAKKGKTKQKSSEVVVLEDLGVEYLEQLLTLSDQTTS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1758 204 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Alju01g1758 204 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Alju01g1758 204 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Alju01g1758 204 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
Alju01g1758 204 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Alju01g1758 204 PANTHER DNA-BINDING DOMAIN 53 197 IPR044808 GO:0003700|GO:0009873
Alju01g1758 204 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Alju01g1758 204 CDD AP2 73 132 IPR001471 GO:0003700|GO:0006355
Alju01g1758 204 FunFam Ethylene-responsive transcription factor 2 71 132 - -
Alju01g1758 204 SUPERFAMILY DNA-binding domain 72 131 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1758 Alju-ChrAlju01 14174861 14175475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1758 61 202 AP2-EREBP Transcription Factor Family AT3G23240 56.164 2.86e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1758 AP2 2.5e-14 CL0081