Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1755 ATGGATTCAGATTCCTTGTTCTTGCAATACACACAACATGAGTGGTGCCCTCTAGATTCCTTTGTTTCTGAAGCATCATCAATATCCTGCTGGGACGACCTCCCACTCTTCAACGACAACGACACCAACTTCTTCTCACAAGATCATACAATGATGTCCATGTCTTCGGATGTTGTAGCCTCCAAGGATTCATCATCGTTGACGGAGTCCAATTCTTCAGGCTCGGAGGCAGTGCAAGAAGTCTCCTCCTGCTCCAAAGTGGAAGAGAAAGAAGAGAAGAGGGTGTACAGAGGAGTGAGGAGGCGGCCGTGGGGGAAATACGCGGCGGAGATAAGGGACTCCACCAGAAAAGGGGTGAGAGTGTGGATCGGAACATTCGACACGGCGGAGGAAGCAGCCTTGGCGTATGATCAGGCGGCATTATCGACACGAGGGTCTCAGGCAGTTCTCAACTTCCCAGAGGAAGTGGTGAGAGAATCGCTGAGGAAGATGCCTCACAAGACATGGCAAGAAGCTTGCTCTCCGGTGTTAGCCCTCAAGAAGAAACACACTTCCACACGAAAGTCAAAGTCAAACTCCAGAACTCATCCTGTCGCCAAAACCCAAGTCCAATCTGCTCATCATCAGCCTGCGTTGGAGCTGGAGGATTTGGGAGCTGACTATCTCGAACAACTTTTGACTCTCACTTGTCATTAA 696 0.5 MDSDSLFLQYTQHEWCPLDSFVSEASSISCWDDLPLFNDNDTNFFSQDHTMMSMSSDVVASKDSSSLTESNSSGSEAVQEVSSCSKVEEKEEKRVYRGVRRRPWGKYAAEIRDSTRKGVRVWIGTFDTAEEAALAYDQAALSTRGSQAVLNFPEEVVRESLRKMPHKTWQEACSPVLALKKKHTSTRKSKSNSRTHPVAKTQVQSAHHQPALELEDLGADYLEQLLTLTCH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1755 231 MobiDBLite consensus disorder prediction 181 209 - -
Alju01g1755 231 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
Alju01g1755 231 MobiDBLite consensus disorder prediction 62 84 - -
Alju01g1755 231 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Alju01g1755 231 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Alju01g1755 231 CDD AP2 96 154 IPR001471 GO:0003700|GO:0006355
Alju01g1755 231 PANTHER DNA-BINDING DOMAIN 63 225 IPR044808 GO:0003700|GO:0009873
Alju01g1755 231 SUPERFAMILY DNA-binding domain 95 154 IPR016177 GO:0003677
Alju01g1755 231 ProSiteProfiles AP2/ERF domain profile. 95 153 IPR001471 GO:0003700|GO:0006355
Alju01g1755 231 Pfam AP2 domain 95 145 IPR001471 GO:0003700|GO:0006355
Alju01g1755 231 Gene3D AP2/ERF domain 95 155 IPR036955 GO:0003700|GO:0006355
Alju01g1755 231 FunFam Ethylene-responsive transcription factor 2 94 154 - -
Alju01g1755 231 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1755 Alju-ChrAlju01 14131262 14131957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1755 83 230 AP2-EREBP Transcription Factor Family AT2G31230 49.425 2.83e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1755 AP2 6.3e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1755 01 14131262 14131957 Alju03g2806 03 53715944 53717465 CCT
Alju01g1755 01 14131262 14131957 Alju01g1755 01 14131262 14131957 ECH