Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1751 ATGGGAAGAGCTCCGTGCTGCCAGAAAGTAGGATTGAAGAGAGGTCCTTGGACTGCAGAAGAAGATCAGATTCTGATCAATCATGTCAACAAATATGGCCACAGTAATTGGCGTGCTCTCCCCAAATTATCTGGGCTTCTGAGGTGTGGAAAAAGTTGCAGACTCCGATGGATCAATTATTTGAAGCCAGACATCAAGCGAGGAAATTTCACCCAAGAAGAAGAAGATAACATCATCAAGCTTCATGAAATGTTGGGAAACAGATGGTCAGCAATAGCAGCCAAGTTACCAGGCCGCACAGACAACGAAATAAAGAATGTGTGGCACACACACTTGAAGAAGAGGCTTCCACATAATTACCAACAGAACCATCCCCAAACAAAAAGAAAATCAAAACAAAAGGAGCCACAACAACAACAACACACCGCCGTGACGGCGGAGAACAACAGGCCACCACTCTCTCCTTCACATTCAAGTGATGTGTCCACCCTCACCGCCACAAACAGCGATAATAGTATAATTACGACCAGTAGTACTCCGGCGACTAATAACGTCACTACTAACGACGACGACATGTCCATGAATATTAATGTTGATGAGTCTCCGGCACCAGCGGAGGAGTCCCTGGCATTGGACGATGATTTCTGGTCGGAAGTCCTTTCGGCTGATAACTCTAAGGGGACTACCGATTATATTCCGGCAGCCGGAGGCGGCAGCGATGTGGAGTCAGAATTTCAGTTTCTGTTCTCTCAACTAGACGAGGCACAAGTAGAAGGAGATCATGTGAGTTCGTTAAGTATGGGCGATGACATAGATTTTTGGTTTGATGTTTACAATAGAGCCGAGGAATTCACAGAGCTACCTCAGTTATGA 873 0.4582 MGRAPCCQKVGLKRGPWTAEEDQILINHVNKYGHSNWRALPKLSGLLRCGKSCRLRWINYLKPDIKRGNFTQEEEDNIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLPHNYQQNHPQTKRKSKQKEPQQQQHTAVTAENNRPPLSPSHSSDVSTLTATNSDNSIITTSSTPATNNVTTNDDDMSMNINVDESPAPAEESLALDDDFWSEVLSADNSKGTTDYIPAAGGGSDVESEFQFLFSQLDEAQVEGDHVSSLSMGDDIDFWFDVYNRAEEFTELPQL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1751 290 CDD SANT 69 112 IPR001005 -
Alju01g1751 290 Gene3D - 11 67 - -
Alju01g1751 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Alju01g1751 290 CDD SANT 16 61 IPR001005 -
Alju01g1751 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Alju01g1751 290 MobiDBLite consensus disorder prediction 114 194 - -
Alju01g1751 290 Gene3D - 68 144 - -
Alju01g1751 290 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 228 - -
Alju01g1751 290 FunFam MYB-related transcription factor 13 66 - -
Alju01g1751 290 SMART sant 13 63 IPR001005 -
Alju01g1751 290 SMART sant 66 114 IPR001005 -
Alju01g1751 290 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Alju01g1751 290 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Alju01g1751 290 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Alju01g1751 290 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Alju01g1751 290 FunFam Transcription factor MYB15 68 142 - -
Alju01g1751 290 MobiDBLite consensus disorder prediction 137 194 - -
Alju01g1751 290 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1751 Alju-ChrAlju01 14067287 14068786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1751 1 290 MYB Transcription Factor Family AT2G31180 48.123 1.36e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g1751 Myb_DNA-binding 1.1e-14 CL0123