Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1742 ATGGAAACTCAGTTTGACACAGATCTTATTGCGATGCAGATTCTTGATGTGGGAAGAAAACTCCATGAAATCAATGGAGCCTGGGGAGAATTCTTGGAGAACATGAGGAGGGTTAGAGGAGTTGCCACTGTCAAACCGGCGGGACACTCAGCAGTTGAACTCAATGGATACGATTCAGGGGCAGTTTTAAAAGAGGCTAGGTACCGAGGCATGAGGAAGAGACCGCGAGGTAGATTCGCCGCCGAGATCATAGACCCCTTGAAGAAAGCTTGTGTCTGGCTAATCACTTTTGACTTCGCCGAGGAGGCAGCTCGAGCCTACGACGCCTCGGCGATAGCCCTCTGTGGAACCAAGGCCAAGAACAATTTCCTTATCTCTCCTTCATTTTCCCCGTTTAAAGTGATTTTGTAA 411 0.4866 METQFDTDLIAMQILDVGRKLHEINGAWGEFLENMRRVRGVATVKPAGHSAVELNGYDSGAVLKEARYRGMRKRPRGRFAAEIIDPLKKACVWLITFDFAEEAARAYDASAIALCGTKAKNNFLISPSFSPFKVIL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1742 136 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 50 124 - -
Alju01g1742 136 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
Alju01g1742 136 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Alju01g1742 136 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Alju01g1742 136 Pfam AP2 domain 67 116 IPR001471 GO:0003700|GO:0006355
Alju01g1742 136 CDD AP2 66 123 IPR001471 GO:0003700|GO:0006355
Alju01g1742 136 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Alju01g1742 136 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Alju01g1742 136 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1742 Alju-ChrAlju01 14001381 14002394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1742 35 135 AP2-EREBP Transcription Factor Family AT3G20310 55.340 3.07e-24 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1742 AP2 2.5e-08 CL0081