Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1734 ATGATTTTGACTCGTAAAAGACTGCAGAGTATAAACAAAACAAAAAGAAAGAGGGCTTTGATTCCCACAGGATTCTGCTCAAGCCCCATAATTAAAGAAATCGACGAAACTGGCTGCTTCCCAGAATCAAGAACTATGGAATTGACAAAAAGAGGAATGTCTGGGAAATCCAAAAATAAAGAAATCCCTCCAGCTCCCCCTGGTTTTAGATCCCTTACGGCTTTCACACTACAAAAAGTTTCAAAGACTGATAAATCTGAAAGTGATCCAATTTGCATGGAGAGTATATTGAAGCTAGATGACACTGGTGCATTGAAGGCAATTCTTAGGCATCGTCCATGGATACATTTTGATCAAAGTGACCATGACCTTGAGAAATCCGACACAGAGCAGTTTCCTCAGGGTTTTTCTTCAAATGCTTGTCGTCCGAAAGGGGTTACTCTCGGTTGTCCAGACTGTAGTGATTGCCTAAAGGTAACTGCAAGGTGGCGCCCTGAGGATTCAAGAAGAGATGTCCTTGATGAAGCTCAAATTTTCCACCCAACAGAAGAGGAATTCAAAGACATGCATGAATATATTGCAAGCATACGTTCCAAAGCAGAGCCTTACGGAATTTGTCGTATTATTCCTCCTCCTACCTGGCAACCACAATGTCTTCTCGAGGAAAAAGACATATGGGAAAACTCCCAATTTGTTACTCGGATTCAACGGATTGATGGACTTCAAGTTCAGTGCCAACGAGAAGTTATGGACAACTCTTCCAAAAGTTCAGAGACCAAGACCAGAAGAGGTCTAGGAGTAGCTTTGGACTCTCAACCTGGTAAGGAAAATCCACATGATGTTGAAGACTCTGAGTCTAAACCTGGCCCTACCTTCAGTCTCAGTACATTTAAGAAATTTGCTGATGATTTCAAGGCCAAGTACTTTGACTGTGACAATAGTGTTGTGGGTTCTGATGAAAAGTGGGAGCAATCTGTGGAAAATATTGAGGGTGAGTATGGACGGATTATCCAAAATCCAACTCATGAAATTGAGGTGCTTGTTGGTAACAACTTGGGGGCTGGAGTTTTAAGCAGTGGATTTCCAATGATGTCTGATCCTCTGGAGTCACTTAAATATCCTGAATATATGAGATCTGGATGGAACTTAAATAACGTGTGTATGCAATCTGGTTCTCTTCTTTCATTTGAAAGCTCTGAGGTTTCTAGCAAATTTACCCCTCGGTTTCATGTTGGAATGTGTTTTTCTTCATTCAATTGGGAAGTAAAAGAGCACCACTTGTACTCATTGTGTTACATGCATGTGGGTGAGCCTAGAGTTTGGTATAGCATTCCAGGAAGATTTGCTGTTGACTTTGAAACAGTGAGGAAGGAGCATCTCCCGGTTTTGTTTGCAAAACAGCCTGACTCGCATGACAATTTGTTATCCTCCACCATATTGAAGTCAGAGGGTATACCAGTATATCGCTGTGTTCAGTATCCCCGGGAGTTTGTTCTTGTCTTCCCAGGAGCATACCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTCAGTTTTGCTCCTCTTGATTGGCTGCTTCATGGACAGAAAGTTGTAGAGTTATATTGTGAACAAAGGAGAAAGACTTCAATCTCATACGATAAGCTGTTACTTGGGGCAGCAAGGAAAGCTGTTACGGCACAATTTAACATTGAATTCTCTAGGGCAGGTAACCCAGATTATTTAAAATGGAAAGATGCATGTGGAAAGAATGGGAAATTAACAAAAGCTTTTGATTTACGGAGAAAGATTGAAAGTTTAAAGAGGGAATTTCTTTGCGCTTCTCTGAAATCTCAGAGAATGGAAAAAGATTTTGATGCCACATGCAAAAGAGAATGTTGCATATGTCTACGTGACTTACACTTATCTGCCGTAGGTTGTCCATGTTCAACCGACAAATTTGCATGTCTTAATCATGCAAAGCAGCTCTGTTGTTGCCCTTGGAGTGACAGATTTATCCTCTGCCGATATGAAATGACTGAGTTGGATACCCTCCAGCTTGCTTTGGAGGGAAAAGCAAGTGCTGTCCACAGATGGGCCAAGGCCGATTGTGGATTAACTGTGGTCTCCCTTGCCTCCAAAAGAAATGTGAGTGGTTCGCCGTCTACTCCAAGCTCAAGAGAAGCATTTGTGAATTCACTGAAACGGAGAAGAGAAGGATTCGAGTCTGAAGTTACGAGCATGGATGGTATCTCTTCTAGCATTGAGGCAAAATCGAAGGCAAAAAAACAGAAAACGGCAGGCCACCAATCTACAGAAAGACATGGTGTCGATTCTGCCGCGGCCATTAAACCTAATCCCAAGCCACGCAATGTTCAGTCATCAACTCCAAATTTGGTTAAAAATGACCCAAAAGTGGCTGGGGATTTTCTAGGTCTTAGCTTAACGTCAGGTTATATGGCACTGCTGCCTGAGATCAGGGCACATGATGTTTCTTCAGATAGTTCATCTTCATCATCAGAATCCGATGATGACGAACTATGA 2529 0.4195 MILTRKRLQSINKTKRKRALIPTGFCSSPIIKEIDETGCFPESRTMELTKRGMSGKSKNKEIPPAPPGFRSLTAFTLQKVSKTDKSESDPICMESILKLDDTGALKAILRHRPWIHFDQSDHDLEKSDTEQFPQGFSSNACRPKGVTLGCPDCSDCLKVTARWRPEDSRRDVLDEAQIFHPTEEEFKDMHEYIASIRSKAEPYGICRIIPPPTWQPQCLLEEKDIWENSQFVTRIQRIDGLQVQCQREVMDNSSKSSETKTRRGLGVALDSQPGKENPHDVEDSESKPGPTFSLSTFKKFADDFKAKYFDCDNSVVGSDEKWEQSVENIEGEYGRIIQNPTHEIEVLVGNNLGAGVLSSGFPMMSDPLESLKYPEYMRSGWNLNNVCMQSGSLLSFESSEVSSKFTPRFHVGMCFSSFNWEVKEHHLYSLCYMHVGEPRVWYSIPGRFAVDFETVRKEHLPVLFAKQPDSHDNLLSSTILKSEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVSFAPLDWLLHGQKVVELYCEQRRKTSISYDKLLLGAARKAVTAQFNIEFSRAGNPDYLKWKDACGKNGKLTKAFDLRRKIESLKREFLCASLKSQRMEKDFDATCKRECCICLRDLHLSAVGCPCSTDKFACLNHAKQLCCCPWSDRFILCRYEMTELDTLQLALEGKASAVHRWAKADCGLTVVSLASKRNVSGSPSTPSSREAFVNSLKRRREGFESEVTSMDGISSSIEAKSKAKKQKTAGHQSTERHGVDSAAAIKPNPKPRNVQSSTPNLVKNDPKVAGDFLGLSLTSGYMALLPEIRAHDVSSDSSSSSSESDDDEL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1734 842 SUPERFAMILY Clavaminate synthase-like 289 559 - -
Alju01g1734 842 Gene3D Cupin 161 522 - -
Alju01g1734 842 ProSiteProfiles JmjC domain profile. 375 538 IPR003347 -
Alju01g1734 842 PANTHER LYSINE-SPECIFIC DEMETHYLASE 171 776 - -
Alju01g1734 842 Pfam jmjN domain 178 210 IPR003349 -
Alju01g1734 842 ProSiteProfiles JmjN domain profile. 176 217 IPR003349 -
Alju01g1734 842 MobiDBLite consensus disorder prediction 737 799 - -
Alju01g1734 842 SMART cupin_9 375 538 IPR003347 -
Alju01g1734 842 MobiDBLite consensus disorder prediction 751 767 - -
Alju01g1734 842 MobiDBLite consensus disorder prediction 823 842 - -
Alju01g1734 842 MobiDBLite consensus disorder prediction 248 289 - -
Alju01g1734 842 Pfam JmjC domain, hydroxylase 410 521 IPR003347 -
Alju01g1734 842 SMART JmjN_1 175 216 IPR003349 -
Alju01g1734 842 Pfam C5HC2 zinc finger 628 680 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1734 Alju-ChrAlju01 13921151 13929479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1734 56 803 JUMONJI Transcription Factor Family AT1G08620 41.392 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju01g1734 JmjC 2.5e-29 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1734 01 13921151 13929479 Alju01g1734 01 13921151 13929479 ECH