Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1733 ATGGGTCTTAGAGATATTGGAGCTTCACTACCACCTGGGTTTCGGTTTTATCCTAGTGATGAAGAATTGGTGTGTCATTATCTGTACAAGAAGATCTCAAACGAGGAAGTTCTCAAGGGTACTTTGGCCGAAATCGACTTGCACACATGCGAGCCCTGGCAGCTTCCTGAGGTGGCTAAGCTCAACGCGCATGAGTGGTACTTCTTCAGCTTCCGTGACCGCAAATACGCGACGGGGTACCGGACCAATAGGGCGACGACATCTGGATATTGGAAAGCCACAGGGAAGGATCGCACGGTGGTGGATCCCATCACGAGAGAGGTTGTAGGGATGAGGAAGACGCTGGTGTTCTACAGGAACAGAGCTCCCAATGGTATCAAAACGGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACATATGCCCCCTAAGGAAGACTGGGTTTTGTGTAGAGTATTTCACAAAAACAAATCATCAGATGACAACCACAACAGCAACAAACTCATGTTGGACTCTATTTCATCTCCTTCCCTAACTTGGGCTTCTTCATCTTCTCCGACGACCAACCACCATACCTACCCTCTCCTCGCCTGCAATAACCAACTTTCTTCTTCATCCTCAATCCCTGCCTTCATTAACCACCATCACACCCAACCCAATCATCATTCTAATAATGCCCTCGTCAACTTCCTTCAATTTTCTCGGGAAACAAACACCGCCGCCACCAGCACGGTCACTCATCAGGACCAGATTAGCCCCAGAGGAGGAGGAGGAGAAGCCGGCGGTGACGGTGGCGATGATGGTGGTTGTGGCTTCTTCAGTTGGGACATGAGCCTCGAAGATAACGCCAGCTTTCAGAATGGCCTCGACGTTATGAGATCATCCTTCGAGGTTGATAATAGTAGCATGGTCTTGTTATGA 924 0.4935 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKISNEEVLKGTLAEIDLHTCEPWQLPEVAKLNAHEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVVDPITREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKNKSSDDNHNSNKLMLDSISSPSLTWASSSSPTTNHHTYPLLACNNQLSSSSSIPAFINHHHTQPNHHSNNALVNFLQFSRETNTAATSTVTHQDQISPRGGGGEAGGDGGDDGGCGFFSWDMSLEDNASFQNGLDVMRSSFEVDNSSMVLL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1733 307 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Alju01g1733 307 SUPERFAMILY NAC domain 8 157 IPR036093 GO:0003677|GO:0006355
Alju01g1733 307 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Alju01g1733 307 MobiDBLite consensus disorder prediction 244 266 - -
Alju01g1733 307 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Alju01g1733 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1733 Alju-ChrAlju01 13909092 13912988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1733 6 179 NAC Transcription Factor Family AT1G56010 53.846 6.63e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g1733 NAM 2.4e-37 No_clan