Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1725 ATGGATTCGGCCAGAGGTTGGTTTCAGAAGTTTCATCCTAGGGATAAAATGAGGTCTTCTTCGAAGAGGAAGGACGGTTCTGAAGGAGGAATCGAAGATTCAGATGCACAGCTGGATGAAGAAGCTCTTTCTAATATAACAAAACAAAAGGTTGCAGCGGCGAAGCAGTATATAGAAAACCATTACAAGGAGCAAATGAAGAGCCTTCAGGATAGAAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTTTTCAAGTTTCTGGAGAAAAAGGAAACCGAATACATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACTATGATTGGAAAAGGTGCATTTGGAGAGGTCAGAGTCTGCAAGGAAAAGACAACAGGCCATGTATTTGCAATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGATAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAAGATGATGACTACCTATACCTGATTATGGAGTATCTACCGGGTGGGGACATGATGACTTTACTTATGAGAAAGGATATCTTGACTGAGGATGAAGCTAGATTTTATGTCGGAGAAACAGTTTTGGCCATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAGCCTGATAATTTATTATTGGATAGATATGGACACTTAAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAGCATAATTCAAGAGGGGGACTTTTCGGAAGGTCAGTGTGTGAATAGTTCTACACTGAATGGTGGACATGGATCTTCAACTCGCACACAACAAGAACAGTTACAACACTGGCAAAAGAACAGGAGGACACTAGCTTATTCTACTGTTGGGACGCCGGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTATGAAATGCTGGTAGGATATCCTCCTTTTTATTCTGACGATCCAATGACAACTTGCAGAAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCCGAAGAAGCAATGCTATCTCCTGAAGCTATAGATTTGATCAGTAAACTACTGTGTAATGTGAATCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGCTCATCCATTTTTCAAAGGTATTGAATGGGATAAGCTATACCATATGGAAGCTGCATTTATACCTGAGGTTAATGATGACTTAGATACTCAAAATTTTGAAAAGTTTGATGAGTCCGACGGCTGCAGTCAACCATCTTCTAGGAGTGGTCCATGGAGGAAGATGCTCTCATCTAAAGACGTGAATTTTGTTGGGTACACGTATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCCGGAATGGCTGAATTGAAAAAGAAAACCTCCAAAGTTAAGAGGCCATCCGTCAAGTCACTTTTTGATGACGAGACAGCTGAAACAGCAGAAGCCTCTGAGGCTTCATCAAGCAATAATGAATCTGCTTAA 1608 0.403 MDSARGWFQKFHPRDKMRSSSKRKDGSEGGIEDSDAQLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQDRKERRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCKEKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSIIQEGDFSEGQCVNSSTLNGGHGSSTRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAIDLISKLLCNVNQRLGSKGAGEIKAHPFFKGIEWDKLYHMEAAFIPEVNDDLDTQNFEKFDESDGCSQPSSRSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKTSKVKRPSVKSLFDDETAETAEASEASSSNNESA 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1725 535 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
Alju01g1725 535 MobiDBLite consensus disorder prediction 501 535 - -
Alju01g1725 535 Coils Coil 534 535 - -
Alju01g1725 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 470 - -
Alju01g1725 535 CDD STKc_NDR_like 118 482 - -
Alju01g1725 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Alju01g1725 535 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Alju01g1725 535 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1725 535 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Alju01g1725 535 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Alju01g1725 535 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju01g1725 535 MobiDBLite consensus disorder prediction 501 518 - -
Alju01g1725 535 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju01g1725 535 CDD MobB_NDR_LATS-like 54 115 - -
Alju01g1725 535 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Alju01g1725 535 MobiDBLite consensus disorder prediction 1 39 - -
Alju01g1725 535 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1725 535 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Alju01g1725 535 Gene3D Phosphorylase Kinase; domain 1 118 203 - -
Alju01g1725 535 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Alju01g1725 535 MobiDBLite consensus disorder prediction 7 31 - -
Alju01g1725 535 Gene3D Transferase(Phosphotransferase) domain 1 313 436 - -
Alju01g1725 535 Gene3D Transferase(Phosphotransferase) domain 1 204 268 - -
Alju01g1725 535 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1725 Alju-ChrAlju01 13813860 13821727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1725 1 514 AGC Kinase Gene Family AT2G20470 78.736 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Alju01g1725 Pkinase 1.1e-63 CL0016