Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1724 ATGATGAAAGTGGGATTTGAGGTGATCCATGGCGATCTCAATAACATGATCAGACCAGTACATATGCATGAATCTTGGGACTACCCGAATATTAATGTTGGGTTGTCTTCTTCAGCTCCAACATCATCGTCAATAATTCCATTTTCAAAGCCAACACCACCCAATATTGACACCACCATCACCACCACTCACAATACTGTAAACTTGGCAACAAACGAGCTTTCAGATTGGGTGGAGCATTTTACCAAACACCTTGTGGACGACTTACCAGCTGCTTCTGAAACCATATCTGATCATAATAATCTCTTTCTTCCTAATTACCAAACAAGGTCTTCTTCTCATCCTCATCCTCATCCTCATCATCATGACAACCTCGTACCCACACCTGTTCTATACCCCAGAAAAGCTCCGTTCAACGACCCGCAAATTCAAATTCAAACCCAAACAAACCCACCAGATCATCATCATCATCACGATGACCTAAACAATGATGGGTTACACCTTTTAACACTTCTAATGGAGTGTGCAGTGGCAATCTCAGTGGACAACCTCAATGAAGCACACAGGATGTTACTTGAGCTATCCCAAGTTGTCTCACCATACAAGCCATCTTGTGCAGAGCGAATTGTGGCCTACTTCGCTAAAGCCATGGCTAGCAGAGTAATGAACTCATGGCTTGGAGTATTTCCTCCTTTAATTGATCACAGAACCATTCACTCTTCATTCCAAGTCTTCCACAACATTTCACCTTTCATAAAATTCGCTCATTTCACTTCAAATCAAGCCATTCTAGAAGCAGTACATTACTGTGACAATATCCATATCATAGACTTGGACATTATGCAGGGTCTTCAATGGCCAGCCTTCTTCCACATCCTCGCCACACGAATCGAGGGCCGACCACGAGTTCGGATGACAGGCATGGGAGCTTCCATGGAACTCCTCGTTGAGACAGGCAAACAATTAACGAACTTCACTAAAAGGCTCGGTATGTCGTTCCATTTCCAGCCAATCGCGAGGAAGTTCGGGGAAATCGAGGATGTCGCCTCCTTGGTGCAAGTAAGCCCCGGCGAGACGCTCGCCGTTCACTGGCTGCAACACTCGCTGTACGACGTGACGGGACCGGACTGGAAAACCCTGAGACTTCTGGAAGAATTAAAGCCAAGAATCATAACCCTGGTGGAACAAGATGGGTCAAACGGCGGGTCGTTTTTGGATCGTTTTGTTGGGTCCTTACATTATTACTCTACTGTGTTTGATTCTCTTGGAGCTTATATGGCGAGTGAGGATCTTAACAGGCACAAGGTTGAGCATGAGCTTTTGGCTAAGGAGATAAATAATATATTGGCCATCGGAGGACCGGCGAGAAGCGGAGAAGACAAGTTTAGACAGTGGAGAAATGAACTTGCGAGGCATTGTTTTGTGCAGATTCCGATGAGCCCTAATTCTATGGCTCAAGCTCAATTGATATTGAACATGTTTTCTCCTTCTCATGGCCATGGCTATACTCTTGCTCATGTTGATGGCACACTTAGGCTTGGATGGAAGAACACTAGCTTGTATACTGCTTCTGCATGGACTTGTTATAATTCCACTCATCATAAACAATTATAA 1614 0.4455 MMKVGFEVIHGDLNNMIRPVHMHESWDYPNINVGLSSSAPTSSSIIPFSKPTPPNIDTTITTTHNTVNLATNELSDWVEHFTKHLVDDLPAASETISDHNNLFLPNYQTRSSSHPHPHPHHHDNLVPTPVLYPRKAPFNDPQIQIQTQTNPPDHHHHHDDLNNDGLHLLTLLMECAVAISVDNLNEAHRMLLELSQVVSPYKPSCAERIVAYFAKAMASRVMNSWLGVFPPLIDHRTIHSSFQVFHNISPFIKFAHFTSNQAILEAVHYCDNIHIIDLDIMQGLQWPAFFHILATRIEGRPRVRMTGMGASMELLVETGKQLTNFTKRLGMSFHFQPIARKFGEIEDVASLVQVSPGETLAVHWLQHSLYDVTGPDWKTLRLLEELKPRIITLVEQDGSNGGSFLDRFVGSLHYYSTVFDSLGAYMASEDLNRHKVEHELLAKEINNILAIGGPARSGEDKFRQWRNELARHCFVQIPMSPNSMAQAQLILNMFSPSHGHGYTLAHVDGTLRLGWKNTSLYTASAWTCYNSTHHKQL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1724 537 Pfam GRAS domain family 169 527 IPR005202 -
Alju01g1724 537 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 523 IPR005202 -
Alju01g1724 537 ProSiteProfiles GRAS family profile. 159 527 IPR005202 -
Alju01g1724 537 MobiDBLite consensus disorder prediction 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1724 Alju-ChrAlju01 13808603 13810310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1724 162 527 GRAS Transcription Factor Family AT3G54220 54.155 1.75e-129 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju01g1724 GRAS 3.3e-99 CL0063