Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1709 ATGAAGTGCCTATGTTCAGGTGAGCAGTTAAGAGGAGAAGACGAAATGATTCCCTCATCCGAATCTCATGCATCCAAGGATTATTCAGTGAGTGGGGATTCTTGCACAGCTGGACAAGTTGACAAGAAGAAACCAGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGCTACTTGAACTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATTTCAGAAAGGAAACGTTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATAGGTGCCGTGACTCCTAAAATTAAAATTTCCCTTGCCCAAAAGGCAGAACAACCTAAGAGACACAAGAGACATTCCCAGCATTATGCAGCACCCCCAATGTCAATACATGCTGTTGGCCTATTGTTGGAATCGGTCCTCTTGAAATCAAAATCATTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCAGAAGGTTTGCCTGAAAACTTTGGTGCCGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCGGAACTATGGAAACTTGCTGATAGTCCACGTGAAACTATTGTGTCTTATAGGCGGGCACTCCTTCATCGATGGAATCTTGACGCAGAGACTACAGCAAAGATTCAGAAAGAGTTTGTCATATTTCTTCTATATAGTGGCGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATATTGGTAAGAAAAGTCTCGTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGATCACCTTTCGTTTGCTCTATCTGTTTCTGGGGATTTGACAACTCTTGCTAATCAATTGAAACAATTGCTCCCTGGGACTGTCAGCCGGAGAGAAAGGTATTTTACTCTTGCTCTCTGTTATTTTGGAGCTGGAAAGGACTTGATGGCTCTGGATCTTCTCAGAAAAGTGTTGAGTAGTAAAGAGGACCCTAAACATATTCCAGCTTTGTTATTGGCATCTAAAATATGTTCTAATAACCATAGTCTTGCTGAAGAAGGGGTAAGCTTTGCTTCCAGAATGCTTGAGAGCTCGGATGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTGCTTACTTGGCGTTTCACATTCAGCAAATTCAAAATTAGCCATTGCTGATTCTGAGAGATTTGAGAGGCAATCTGAGGCACTTCGTGCTCTGGAAACTGCTGGAAAAATGACTCAAATGAGAGACCACAATGTATTATACCATCTTAGTTTAGAATATGCGGAACAGAGGAAGTTGGATTCTGCATTTCGTTGTGCAAAATGCCTTCTAAAACTGGAAGCTGGGTCTAATGTCAAAGGGTGGCTGTTGTTAGCTCGAATATTATCTGCTCAAAAACGGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTTATTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAGGAGTGCGATTGAGACACACACTCAACTTCTTGCTGTTTTTCAAGTTCAAAAGAAAGCATTTGGTTCTGGGAAGAAGCTATATAAGGAGAACAGAGATCATTCAAGGAACCTGGAAGTCGAAGTATGGCATGATCTTGCCCGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATGTGTCTTTCTAAGTCTAAGGCCATCAAACTTTATTCTGCTTCTAGATGTCATATAACAGGAACACTGCATGAAGCAAAGGGTCTTTACAAAGAGGCTTTAAAGGCTTTTGGTGATGCTTTGAACATTGATCCCAATTATGTGCCAAGCTTGATTTCCAGTGCCTTGGTTCTGAGACGGTGCAGTATTAGCAAGGAAGCAAATGCTGTAGTGAGAAGCTTTTTGATGGATGCACTGCGCCATGATAGATTGAATGCTGGTGCATGGTATAATCTTGGACTTGTTCACAGGGATGAGGGTACAGTCTCGTCATTAACGGAAGCTGCAGAATGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAACCTTTCAGGTAA 2157 0.4172 MKCLCSGEQLRGEDEMIPSSESHASKDYSVSGDSCTAGQVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNVEAALHVFEGIDIGAVTPKIKISLAQKAEQPKRHKRHSQHYAAPPMSIHAVGLLLESVLLKSKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPELWKLADSPRETIVSYRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILVRKVSLNRIEWDPSILDHLSFALSVSGDLTTLANQLKQLLPGTVSRRERYFTLALCYFGAGKDLMALDLLRKVLSSKEDPKHIPALLLASKICSNNHSLAEEGVSFASRMLESSDDRCDKLESVANCLLGVSHSANSKLAIADSERFERQSEALRALETAGKMTQMRDHNVLYHLSLEYAEQRKLDSAFRCAKCLLKLEAGSNVKGWLLLARILSAQKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLRSAIETHTQLLAVFQVQKKAFGSGKKLYKENRDHSRNLEVEVWHDLARVYISLSQWHDAEMCLSKSKAIKLYSASRCHITGTLHEAKGLYKEALKAFGDALNIDPNYVPSLISSALVLRRCSISKEANAVVRSFLMDALRHDRLNAGAWYNLGLVHRDEGTVSSLTEAAECFEAAHFLEETSPVEPFR 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1709 718 Gene3D Tetratricopeptide repeat domain 45 548 IPR011990 GO:0005515
Alju01g1709 718 Gene3D Tetratricopeptide repeat domain 549 714 IPR011990 GO:0005515
Alju01g1709 718 PANTHER PROTEIN NPG1 1 718 IPR043376 -
Alju01g1709 718 SMART tpr_5 676 712 IPR019734 GO:0005515
Alju01g1709 718 SMART tpr_5 478 511 IPR019734 GO:0005515
Alju01g1709 718 SMART tpr_5 604 637 IPR019734 GO:0005515
Alju01g1709 718 SMART tpr_5 570 603 IPR019734 GO:0005515
Alju01g1709 718 SMART tpr_5 321 354 IPR019734 GO:0005515
Alju01g1709 718 SMART tpr_5 514 547 IPR019734 GO:0005515
Alju01g1709 718 SMART tpr_5 443 476 IPR019734 GO:0005515
Alju01g1709 718 MobiDBLite consensus disorder prediction 1 55 - -
Alju01g1709 718 SUPERFAMILY TPR-like 570 708 IPR011990 GO:0005515
Alju01g1709 718 ProSiteProfiles TPR repeat profile. 604 637 IPR019734 GO:0005515
Alju01g1709 718 SUPERFAMILY TPR-like 322 599 IPR011990 GO:0005515
Alju01g1709 718 MobiDBLite consensus disorder prediction 22 36 - -
Alju01g1709 718 Pfam Tetratricopeptide repeat 451 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1709 Alju-ChrAlju01 13683678 13688363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1709 1 718 Calmodulin-binding Proteins AT4G28600 57.084 0.0 779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g2780 03 53526457 53529818 Alju01g1709 01 13683678 13688363 CCT
Alju01g1709 01 13683678 13688363 Alju01g1709 01 13683678 13688363 ECH