Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1707 ATGAAATCTCAGCCGTCCAGAGGCATTATTCTTTTGCACCAGTGTCCGTGGTTCGACTTCTACTCCCAGACGCAAATGGAGGACTCTGGGAAGCTTGGCAACAACAACAGTAAATTTTTGAACCCATGGATGCTTCAGTTCCAGAAAATGGGTCTTGAACTCAAGTGCCCTCTCTGTCTAAACTTGTTCAAAAGGCCTATGTTACTTCCATGCAACCACATATTCTGCAGCCCCTGCATAGCTGATTGCTCAAGGCCTAGTTCAGAATGTGCTGTCTGTAGTATTCATTATGCTCAAAGAGATCTGAAGTCTCTGCTTATTGTGGAAAACATGGTTGCAATTTATAAAAGCCTGGATGCTGCCTTTTATGCCAGTCTTTCTCAGAATCGTTCTCCTGATGAGCTGCCAGTTTTGGAGCGGGGCGAAACCATGTTAAATGCAACTTTTAATTATAAAATGTCCAAGGAGCCGTCCAAAACATCTCTAGGAGATAATCTGCATAGGGAGCAGTTAGTCTATTCACAAACAATGGCTGAATTTGTTATGGATCCCTTCAGATTAGACCATTCTATGGATGTGGATATTAGCAAGAATCACAAATATGAGAAGAGTGGTAATGTGGTTCATGGTAAAGATGAGACTTTTGAGGTTTCTCGCAAGGAAGAGATTCTGATGAAGTGTTCTCAACTGGATGGAAGGGCCCATGAAGATTGTGGGCTGGTGGAAATGGACATAAATCAAGTTACTCAATCTTCACCAGGCAGCCCTCCATTTTGTGATACAAAAGGTTCAGACAATGACTGCAGTGACCGGTACAGTGAACATCACATACCTGCTGAGAGATTAGAAAGTTCTTCATCAAAGAGAGCAAGCAAAGGAAATGAAATATTGGAAAAAAGGATTCAGTTAAGGTCTGAAAGCTCTGCCTCTGAAACAGAGGGTCTTATGAGAGACTCCAAGAGGCCAAAAAACCTTTCACACGACAATGATGGCATTCAAACTAATGTAACCCATCAAAGTAGGCCCATGACTGCTGAATGTAACTCAAACCTTAAATCTAGGATTGACCTGGATTCATGTTCAAATACAAGCGTGTGCTCTTTTTGCCAGTCTTCTAGAACCTCAGAGGTTACTGGGCCAATATTGCATTATAAAAATGGAGATTTGCTGATTGGAGTTGCAACACTCCAACCAAATGTCATACATGTGCATAAACTTTGCATTGAATGGTCACCTCAAGTGTATTTTGTTGATGAAACTGTTAAAAATTTGAAGGCAGAAGTGGCAAGGGGAGCAAAGCTAAAATGCAGCAAATGTGGCCAAAAGGGGGCTGCTCTTGGCTGCTATGTTAGATCCTGTAGGAGAACTTATCATGTTCCTTGTGCAATGGAAATCTCAGCTTGCCGTTGGGATGATGAGGAATATCTAATGCTCTGTCCAGCTCACTCTCATGTCAAATTTCCACATGAGAAATCCAGATCTAAGAAACAAGGCTCCCAGAAGCATCCTGTGTTATCTCATTTGGTACCTAAGCCGTCAAAACCCCCAATAGTTTTGTCAGATGATAGTAAACATTTGGTTTTCTGTGGTTCTGCTCTGTCAACAGATGAAAAGATACACTTGATCAATTTTGCCAGTAGAATTGGTGCTACTGTTACCAAGTTTTGGACGCCAGATGTGACACATGTGGTTGCAGCAACTGATTCAAACGGAGCATGTGCCAGGACACTTAAAGTCCTTATGGGCATTTTGAATGGGCAGTGGATTCTTAAAATGGACTGGGTAACTGCAAGCATGGAGGTGATGCGTCCTGTGGAAGAAGAGCCATTTGAAATAAGTCTTGATAACTATGGCTGTCAAGGTGGCCCAAAAGCTGGCAGACTTCGGGCATTGGCCAATGCGCCCAAGCTATTTAGCGGCTTTAGTATGTACTTTTCTGGTGATTACATGTCAGATTATAAGGAGGATCTTGTAGACTTGGTTGTAGCAGGAGGAGGTACTGTTTTGGAAAGCAAGGAAGAATTGCATACAAAAGGTCATGAATGCAAGGAGGGCTCAAAGCTGATTGTTTACAATCTTGATCCCCCACAAGGAAGCAGGTTGGGGGATGAAGTTACAATTCTTTGGGAGAGATTAAACGAGGCAGAGGATTTAGCTGCTACTTCTGGCTCACAAGTCATTGGTCACACGTGGATTGTGGAGTCAATTGCTGCATGCAAGTTACAGCCTTTTGTTAGTTAG 2241 0.4261 MKSQPSRGIILLHQCPWFDFYSQTQMEDSGKLGNNNSKFLNPWMLQFQKMGLELKCPLCLNLFKRPMLLPCNHIFCSPCIADCSRPSSECAVCSIHYAQRDLKSLLIVENMVAIYKSLDAAFYASLSQNRSPDELPVLERGETMLNATFNYKMSKEPSKTSLGDNLHREQLVYSQTMAEFVMDPFRLDHSMDVDISKNHKYEKSGNVVHGKDETFEVSRKEEILMKCSQLDGRAHEDCGLVEMDINQVTQSSPGSPPFCDTKGSDNDCSDRYSEHHIPAERLESSSSKRASKGNEILEKRIQLRSESSASETEGLMRDSKRPKNLSHDNDGIQTNVTHQSRPMTAECNSNLKSRIDLDSCSNTSVCSFCQSSRTSEVTGPILHYKNGDLLIGVATLQPNVIHVHKLCIEWSPQVYFVDETVKNLKAEVARGAKLKCSKCGQKGAALGCYVRSCRRTYHVPCAMEISACRWDDEEYLMLCPAHSHVKFPHEKSRSKKQGSQKHPVLSHLVPKPSKPPIVLSDDSKHLVFCGSALSTDEKIHLINFASRIGATVTKFWTPDVTHVVAATDSNGACARTLKVLMGILNGQWILKMDWVTASMEVMRPVEEEPFEISLDNYGCQGGPKAGRLRALANAPKLFSGFSMYFSGDYMSDYKEDLVDLVVAGGGTVLESKEELHTKGHECKEGSKLIVYNLDPPQGSRLGDEVTILWERLNEAEDLAATSGSQVIGHTWIVESIAACKLQPFVS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1707 746 Gene3D BRCT domain 634 739 IPR036420 -
Alju01g1707 746 ProSiteProfiles Extended PHD (ePHD) domain profile. 363 483 IPR034732 -
Alju01g1707 746 PANTHER BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 261 744 IPR031099 GO:0006281|GO:0006974
Alju01g1707 746 Pfam PHD-like zinc-binding domain 404 483 - -
Alju01g1707 746 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 360 485 IPR013083 -
Alju01g1707 746 Pfam BRCA1 C Terminus (BRCT) domain 534 598 IPR001357 -
Alju01g1707 746 ProSiteProfiles BRCT domain profile. 633 746 IPR001357 -
Alju01g1707 746 CDD BRCT_Bard1_rpt1 526 605 - -
Alju01g1707 746 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 125 IPR013083 -
Alju01g1707 746 SUPERFAMILY BRCT domain 637 743 IPR036420 -
Alju01g1707 746 SMART ring_2 436 482 IPR001841 -
Alju01g1707 746 SMART ring_2 56 93 IPR001841 -
Alju01g1707 746 ProSitePatterns Zinc finger RING-type signature. 71 80 IPR017907 -
Alju01g1707 746 SMART PHD_3 435 483 IPR001965 -
Alju01g1707 746 MobiDBLite consensus disorder prediction 264 327 - -
Alju01g1707 746 SMART BRCT_7 635 739 IPR001357 -
Alju01g1707 746 SMART BRCT_7 516 602 IPR001357 -
Alju01g1707 746 FunFam Breast cancer type 1 susceptibility protein homolog 523 629 - -
Alju01g1707 746 SUPERFAMILY BRCT domain 526 613 IPR036420 -
Alju01g1707 746 ProSiteProfiles BRCT domain profile. 526 612 IPR001357 -
Alju01g1707 746 SUPERFAMILY RING/U-box 48 113 - -
Alju01g1707 746 MobiDBLite consensus disorder prediction 248 341 - -
Alju01g1707 746 Pfam RING-type zinc-finger 56 84 IPR027370 -
Alju01g1707 746 ProSiteProfiles Zinc finger RING-type profile. 56 94 IPR001841 -
Alju01g1707 746 Gene3D BRCT domain 523 628 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1707 Alju-ChrAlju01 13630780 13636335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1707 556 669 Core DNA Replication Machinery Family AT4G02110 30.252 8.36e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1707 01 13630780 13636335 Alju01g1707 01 13630780 13636335 ECH