Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1706 ATGGGTTGTTTTCTTGCATGCTTTGGTTCATCTAAAGATGCCAAACGCAGAAAACAGAGGCGCAAGATTCCGCCTCATGACTGTGACCAACGGTGTACAACTAGCAAGGAAGAGCAATCTTGTGTCAATTCAGTTCAGGATCACTCCAAACCCGTCACAATCAGCACCGCATCAAAAGTCCAGGATATCAAGCCTGAGGAGCAGTTAAGCTTGAGTACGAGGAAGAAAGTAACATTTGATTCTAATGTGAAAACCTACGAGCCAGTTTTGCCAGATGAAGTTACGGAGCTTCACTTGGAGAAGTGTGAACAAGGTGGGAATAAGGAAGAAGGTTTGGTGAAATCAAGCCAATCCAAGTCTTCCTCAGACGCTAGTTCTGTGACTTCTACACGATCTTATCCTCCGAATAGCAGATACCAAAATTGCAGAGAAAGCGATGATGGAGATGAAGAAATGGATTATGGGGTTACTGACCTTAGTGATGAAGACAGTGACATGGGAGAAGAATTTGGCGAGGACTTCGACGATGATATTGTGTATTCAAGGGCGAGAACTTGTGCTGCTCAAAAGGCTGCTGAGGAAATAAAGAGTCCAATCACAACTAGTTCTTTGTGTGAGAGCGAAGCGAAGCCAATTGTGATGAACCTAAATGCTCGAGATAGAAGTGTTTATGTTCATCCTGTGCTGAACCCAGTAGAAAATCTCACCCAGTGGAAAGCTGTTAAAGCCAAACGAACACCGCAACCAATCCCTCAGAAAGAGAATTCCAATTCCAATAAAGAGTATCAGATCCCTTTTAGTTCAGAACCCAGCTTCAAGGAACGATCTCAAGGGATTGACTCTTCAAAGAAATCGAAGCAGGAAATTGCAGTTGATGCTAGCCTCTCAAATTGGTTGGGTTCATCAGAAACTACACCAGTTAACAAGCCTAGTTCAGTTGCTTTGTATGCTGGCACGCCTGACAGGAGCACTTCACAAGGTTCAGTAGTAAGCCATGAAGATAGACCCATTTTGGGTGCATTAACAGTTGAGGAGATTAAGCGGTTTTCAGCTTCCAATTCACCAAGGAAGTCACCAAGTAAGAGTCCGGATGAGATGCCAATTATAGGGACTGTAGGGACATATTGGAGTCACTCGGGCTCCGTTAAGGATTCTGGCTCTGGAGCCTCCTTTAAAGGAATTCCTAACACCACAAGCAAGTACAGAGAGGATAAGAAGGTGAATTGGCATTCAACCCCATTTGAGACAAGATTAGAGAGAGCTTTAAATAGAGGCGCTGCTGAAGTTGCTTGCACTCATGTTCCATCTCTTGTCATAGAGAAACCATATGTTGGGATAGGCATGACAACCTTTCCAAAAGCTCCTCCTTTCCTCTTTCTTCTACTCTTTCTTCCATTGCAGATCATTGCTTCTCCTAGAACTGAAGCAGAAGCTCTTATCAAGTGGAAAACAAGTCTCTCTCTTCCTGTTCCTGATTTTCTCAATTCATGGTCCCTCACCAACCTCAACAATCTCTGCAGTTGGGAAGCCATTGTTTGTGATGATACTAACACAACAATCTCAGAGATAGATCTCTCTAATGCAAACCTCACTGGGACACTTGAAGAGTTGGATTTCGCTTCTCTTCCCAATCTCTCCCTATTCAACCTCAATAGCAACAGTTTCAGTGGGTCAATTCCTTCTGCAATTGGTAACCTCTCCAAGATCAGTTTCTTGGACCTGGGATCAAACTTCTTTGAAGGAACACTTCCTTCTGAACTGGGTCAGCTAAAGGAGCTTCAATATCTTAGTGTTTACTTCAACTATCTCAACATTACTATTCCTTATCAGATCACAGATCTTCCAAAGGTATGGTACCTAGACCTTGGCATGAACTTCTTTATATCTCCTGCTGATTGGTCATATTGTTCAGGAATGCCATCTTTAACCCACCTCAGTTTGGCGTCCAATTCTATTACTTCCGAATTCCCAAGTTTCATACTGGAATGTCAGAACTTGACATACCTTGACATCTCTCAGAATGACATGTCTGGCCCAATACCAAAATCCATGTATACTAGTCTGGGTAAGCTTGAATATCTCAATCTTACCAATTGTGGGCTAGAAGGACCTCTGTCATCAGATTTGTTCAAACTTTCTAATCTAGAAGAACTTCGCTTGGGGAGTAACAAGTTTTCTGGTCCTATTCCCACAGAGTTAGGATTGATGTCTGGACTTCAATGTCTTGAATTGAATAACAATTCAATCAGAGGGGAAATTCCGGCCTCACTAGGAAATCTCAGTGATCTAGTGATGCTTGATCTCCGTGAGAATTTTTTGAATTCTACTATCCCTTCTGAGCTTGGCTTCTGTACTAATCTAACCTTCCTGAGTTTGGCAGTGAATAATTTGACTGGTCCTTTGCCTTTGTCATTATCTAAACTGACCAAAATAACAGAATTGGGGTTATCAGAAAATTCTTTTTCAGGCCAGCTTTCTTCTTTGTTGGTTTCCAATTGGACTGACTTGGTCTCTTTGCAACTTCAACACAATAAATTCACAGGAAAAATCCCGCCAAAGATTGGCTTGTTGACAAAAATCAAATACTTGTATCTGTATACGAACGAGTTCTTTGGTTCCATTCCTCATGAAATTGGAAACTTGAAAGTACTGATGGAACTAGACCTTTCAGGAAACCAATTCTCAGGGCCATTTCCATCAGCTATTTGGACTCTTTCAAACATTACCACCATAAATCTTTATTCCAATAAACTCTCTGGAAACATTCCCATGGATATTGGAAACTTGACCTCTCTACAAGTTTTCGATGTCAACACTAATTATTTGCAGGGAGAGTTACCAGAGACTTTTTCTCAGCTAACTGGTTTACAGTTCTTTTCTGTATACACCAATAATTTTTCTGGCAACATTCCTAAGAATTTTGGGAAGTATAGTCCTTCTTTGAGCTCTGTCAGCTTCTCAAACAATAGATTCTCTGGAGAACTGCCAAGTGATCTGTGCAGTGGTTTCAAAATAACACATTTGACTGTGAACAACAACACTTTTTCTGGGCCAGTACCAAACTGCTTGAGAAATTGTTCGGAACTAGTTAGAGTTCGTCTTGATGAAAATCAATTCACAGGAAACATCACAGAAGCATTTGGAGTTCATCCCAGTCTTGTTGTTGTCTCGTTGGGTGGCAATCAGTTTTTTGGCGAGCTCTCCCCTTTGTGGGGTGAATGCTTAAACTTAAGCAGGATAGAAATTGACAGAAATAAACTTTCAGGTAAAATTCCACCTGAACTAGGTAAGTTGAGCCGATTGCAATATTTAAGCCTATCCTCCAATGATTTGACTGGCCATATACCACCTGAAATGGGCAATCTTAGCCAGCTTTACATGTTCAACTTGAGCAACAACCATTTCACAGGGAAGATCCCAGAGAGTATTGCCAGATTAGCTCATCTTAATTATCTTGATTTATCAGATAACAACTTCACTGGAAGCATACCAAAACAGCTTGGTAACCATGATGGCTTAAATAGCTTGAATTTAAGTCACAACAATCTAACTGGTGAGATACCATCTGAGCTTGGCAACCTCTTCTCGCTCCAATACCTCTTGGATCTCAGTAGCAACTCTCTTTCTGGGCCAATTCCTCAAAACCTAGAGAAGCTCAATTCTTTGATGATACTCAATCTCTCACACAACCATCTTTCAGGGACAATCCCAGAAACATTTCCAAGTATGCTGAGCCTCCAATCTATTGATTTTTCTTATAATAACTTGACGGGTCCGATCCCAACTGGGGGCATTTTCAAAACATCACCTGCTAAAGCTTATGCTGGAAACTCGTTGTGCGGGGAAGGAAATGGATTGACTGCTTGCTCTACAGCATCTAACCCAGACAAGTCCAAAAGGCTAAACAAAAAGGTTCTTCTTGGGATTATCATACCTGTTTGTGGGCTATTAATCACAGGGATGATCGGATTCCTAATATTCCGTAGGCAGGCCAAACCCCTTGACGAAGAGACCAAAGATAGTGAAAAGAAAGAAAACTCCTTATCTACAACATGGGGAAGAGATGGAAAATTCACATTTGCTGAAATTGTCAAGGCAACCGAAGATTTCAATGAGAGGTACTACATAGGAAAAGGAGGATTCGGAAGAGTTTATAGAGCAGCATTACCAACAGGTCTAGTTATAGCAGTTAAAAGGCTCAATATCTCAGACTCCAGTGACATTCCAGCAGTGAACCGCCAAAGTTTTGAGAATGAGATAAGAACACTTACCCAAGTGAGGCACCGCAATATCATCAAGTTTTATGGGTTCTGTTCCAGCCAGGGACGCATGTACTTGGGGTATGAATATATGAACAGAGGCAGTCTGGGCAAAGTGTTATACGGGGAAGAAGGTAAATCAGAACTAGACTGGCCTATAAGGATAAGAATTGTACAGGGAATAGCACATTCAATTGCCTACCTTCACAGTGATTGTTCCCCACCAATAGTTCACCGAGATGTGACGATCAACAACATACTATTGGACTCAGATTTTGAACCCCGCCTTGCAGATTTTGGCACTGCAAAGCTATTAAGCTACAATTCAACAACCTGGACCTCGATTGCTGGATCCTATGGCTACATGGCTCCAGAGTTAGCACAAACCATGAGGGTGACGGAGAAATGCGATGTGTACAGCTTTGGAGTGGTGGCGTTAGAGATAGTGATGGGGAAGCACCCAAGAGATCTCCTAACTTCGATGTCTTCGATGCAGCATTTATCGTCAATGGAGGAGGATTCAGAGGCGCTTCTGAAGGATGTACTGGACCAGAGGCTACCACCTCCAAGAGGGCAATTAAGAGAAGCAATAGCGTTCATAGTGAGAGTAGGGTTGGGCTGCACGCGTAACAATCCAGAGTCGAGACCAACGATGCGTTCTGTGGCAAAAGAAATTTCGGTTAAGACGCAAACTTGTCTTGCGGAGCCCTTTGGGACGATGACCAAACCAAAGGCAAGTTAA 5001 0.4221 MGCFLACFGSSKDAKRRKQRRKIPPHDCDQRCTTSKEEQSCVNSVQDHSKPVTISTASKVQDIKPEEQLSLSTRKKVTFDSNVKTYEPVLPDEVTELHLEKCEQGGNKEEGLVKSSQSKSSSDASSVTSTRSYPPNSRYQNCRESDDGDEEMDYGVTDLSDEDSDMGEEFGEDFDDDIVYSRARTCAAQKAAEEIKSPITTSSLCESEAKPIVMNLNARDRSVYVHPVLNPVENLTQWKAVKAKRTPQPIPQKENSNSNKEYQIPFSSEPSFKERSQGIDSSKKSKQEIAVDASLSNWLGSSETTPVNKPSSVALYAGTPDRSTSQGSVVSHEDRPILGALTVEEIKRFSASNSPRKSPSKSPDEMPIIGTVGTYWSHSGSVKDSGSGASFKGIPNTTSKYREDKKVNWHSTPFETRLERALNRGAAEVACTHVPSLVIEKPYVGIGMTTFPKAPPFLFLLLFLPLQIIASPRTEAEALIKWKTSLSLPVPDFLNSWSLTNLNNLCSWEAIVCDDTNTTISEIDLSNANLTGTLEELDFASLPNLSLFNLNSNSFSGSIPSAIGNLSKISFLDLGSNFFEGTLPSELGQLKELQYLSVYFNYLNITIPYQITDLPKVWYLDLGMNFFISPADWSYCSGMPSLTHLSLASNSITSEFPSFILECQNLTYLDISQNDMSGPIPKSMYTSLGKLEYLNLTNCGLEGPLSSDLFKLSNLEELRLGSNKFSGPIPTELGLMSGLQCLELNNNSIRGEIPASLGNLSDLVMLDLRENFLNSTIPSELGFCTNLTFLSLAVNNLTGPLPLSLSKLTKITELGLSENSFSGQLSSLLVSNWTDLVSLQLQHNKFTGKIPPKIGLLTKIKYLYLYTNEFFGSIPHEIGNLKVLMELDLSGNQFSGPFPSAIWTLSNITTINLYSNKLSGNIPMDIGNLTSLQVFDVNTNYLQGELPETFSQLTGLQFFSVYTNNFSGNIPKNFGKYSPSLSSVSFSNNRFSGELPSDLCSGFKITHLTVNNNTFSGPVPNCLRNCSELVRVRLDENQFTGNITEAFGVHPSLVVVSLGGNQFFGELSPLWGECLNLSRIEIDRNKLSGKIPPELGKLSRLQYLSLSSNDLTGHIPPEMGNLSQLYMFNLSNNHFTGKIPESIARLAHLNYLDLSDNNFTGSIPKQLGNHDGLNSLNLSHNNLTGEIPSELGNLFSLQYLLDLSSNSLSGPIPQNLEKLNSLMILNLSHNHLSGTIPETFPSMLSLQSIDFSYNNLTGPIPTGGIFKTSPAKAYAGNSLCGEGNGLTACSTASNPDKSKRLNKKVLLGIIIPVCGLLITGMIGFLIFRRQAKPLDEETKDSEKKENSLSTTWGRDGKFTFAEIVKATEDFNERYYIGKGGFGRVYRAALPTGLVIAVKRLNISDSSDIPAVNRQSFENEIRTLTQVRHRNIIKFYGFCSSQGRMYLGYEYMNRGSLGKVLYGEEGKSELDWPIRIRIVQGIAHSIAYLHSDCSPPIVHRDVTINNILLDSDFEPRLADFGTAKLLSYNSTTWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIVMGKHPRDLLTSMSSMQHLSSMEEDSEALLKDVLDQRLPPPRGQLREAIAFIVRVGLGCTRNNPESRPTMRSVAKEISVKTQTCLAEPFGTMTKPKAS 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1706 1666 PANTHER LEUCINE RICH REPEAT KINASE 2 926 1648 - -
Alju01g1706 1666 FunFam Leucine-rich repeat receptor protein kinase MSP1 1334 1450 - -
Alju01g1706 1666 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 978 1293 - -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 39 59 - -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 249 275 - -
Alju01g1706 1666 Gene3D Ribonuclease Inhibitor 732 828 IPR032675 -
Alju01g1706 1666 Gene3D Ribonuclease Inhibitor 829 944 IPR032675 -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 299 336 - -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 299 331 - -
Alju01g1706 1666 ProSiteProfiles Protein kinase domain profile. 1370 1647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1706 1666 Pfam Leucine rich repeat 640 701 IPR001611 GO:0005515
Alju01g1706 1666 Pfam Leucine rich repeat 1100 1159 IPR001611 GO:0005515
Alju01g1706 1666 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1496 1508 IPR008266 GO:0004672|GO:0006468
Alju01g1706 1666 Gene3D Ribonuclease Inhibitor 472 632 IPR032675 -
Alju01g1706 1666 Gene3D Ribonuclease Inhibitor 633 731 IPR032675 -
Alju01g1706 1666 FunFam MDIS1-interacting receptor like kinase 2 637 829 - -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 110 141 - -
Alju01g1706 1666 FunFam Nuclear pore complex protein NUP107 472 631 - -
Alju01g1706 1666 Gene3D Transferase(Phosphotransferase) domain 1 1451 1655 - -
Alju01g1706 1666 SUPERFAMILY RNI-like 522 825 - -
Alju01g1706 1666 Gene3D Ribonuclease Inhibitor 945 1293 IPR032675 -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 146 174 - -
Alju01g1706 1666 MobiDBLite consensus disorder prediction 97 174 - -
Alju01g1706 1666 SMART LRR_typ_2 1098 1122 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 712 736 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 542 566 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 929 952 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 881 905 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 1146 1170 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 760 784 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 639 663 IPR003591 -
Alju01g1706 1666 SMART LRR_typ_2 1219 1242 IPR003591 -
Alju01g1706 1666 FunFam MDIS1-interacting receptor like kinase 2 1451 1651 - -
Alju01g1706 1666 CDD STKc_IRAK 1376 1645 - -
Alju01g1706 1666 SUPERFAMILY RNI-like 753 1064 - -
Alju01g1706 1666 Pfam Leucine rich repeat N-terminal domain 474 514 IPR013210 -
Alju01g1706 1666 SUPERFAMILY RNI-like 963 1260 - -
Alju01g1706 1666 Pfam Protein kinase domain 1374 1643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1706 1666 MobiDBLite consensus disorder prediction 242 287 - -
Alju01g1706 1666 SUPERFAMILY Protein kinase-like (PK-like) 1348 1643 IPR011009 -
Alju01g1706 1666 Gene3D Phosphorylase Kinase; domain 1 1331 1450 - -
Alju01g1706 1666 ProSitePatterns Protein kinases ATP-binding region signature. 1376 1398 IPR017441 GO:0005524
Alju01g1706 1666 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 877 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1706 Alju-ChrAlju01 13621677 13629524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1706 687 1544 Receptor kinase-like Gene Family AT4G08850 42.676 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju01g1706 Pkinase 1.1e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1706 01 13621677 13629524 Alju01g1706 01 13621677 13629524 ECH