Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1701 ATGGCACCCAATCCAAGGGTGGCAGCAGCCTATCGTGCAATGACTGTTCTTGGCATCAAGGAAGTAAAAGTCAAACCCGTATTGAAGCAACTTCTTAAACTGTATGATAAGAACTGGGAACTTATTGAACAAGAAAACTATAGAGTTCTTGCAGATGCTATATTTGAGCAGGAGGAAAAAGAGTTGCAGGGAAAGAAGCAAAAAAACCAGAACAATGATGAAGGAGAAATGGAGGATGAAGAAGCTCATATGCAAGATGAATCAGTGCGACCTTTTAAGAGGCTGCGTTTAAGAGGCCAAGAGAATGAGCTGAGTAGTGGTGGAACCAGCTCAGCTGCCTCCCCATCTAAAATGCCCAAAGTAGAAGATGATGAATTGCCCCAGCAGCCTCAATACAAGGCACTGTCGCCCCATTCCAATAGAAATGCTGAGACTGAAGTTCATCCTGTTCCAGTGCAAGTCAGTCTAGTTGACAAGGGAAAGCAACCTTTATCATCTCAAGATGCTCCTGGAGGAAGAAGAGTTGGATCTGAAAGAGCATCTCCATCAGTGCAACTTAAAGAACCTACAACTGAACAGAGAATTGTGCTGTCACAGAAAAACCAGTTGCCCTATACTCACGAGTTGATCATACCTAAAGATGAGCCTATTGATGAACTGGTAGATTATGATACTCCTATGGCAACAGTTAATCCTGAACTGCCTAGTGGAAGAGACCCTCCAAAGCAGCATTATGCGACTAGAAAACAAGGCAGGAATGGTCCTTTAATGTCAAAACGCAGAGATGTAGGTAGAGGGGAAGGTATTCGGGATTCATCAAATGAAGCGAACCATGAGGTTGTGACAAACCAAGAACGTTCTACCATAGAGATAGCCTCCTCAACATCAGGAGAGGTAAAAATTACTATGAGCTGCAGTTCAGATCTTGGGAGATCAGATTTTCGTTTGCCTAGTCGAGATCAGCTTTTAAAAATGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAATTTTTCTATCATGAAACTGTTGAGAGATATGTGTGACTGCGTGTTGGAATTCAGAACTGATTCAAATGATGACTCACAGGAAGGATCTGAAATGATGACATCGAGTCTAAATGTATTGAAGGAATCTAAGACATGTGATGCTCTGGTTATCAGAGGCAATACAGAAGCTTTAGGAATGCATGCTGGCATGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTGGCTGCATCGCACATTTCCATTTCTCCCCTGCTCACGACTGGTATGAATGATGCTGTACTAGTCACCAATAAGGCCAGAAGTGATTTTCCAGAATGTGAAGATGGAAAGGGGCTGGAGGATCCTATACGTCCTCATTCAGGTAATTTGGTGGTTGTTCAACAGCATCAGCTTACTCCTGATGATCTAAGGTCTCTCCATGGTGCTGACGACCTTTCAAAAGGAGAAGAAAATCTCAGAATTCCATGGGTGAATGAAATAACAAATGATTTCCCTCCACCTTTTCACTATTTGCACCAGAGCATTGCTTTCAGAGATGCTTATGTTAACTGGTGTCTTTCAAAGATCAAGTGTGAGGATTACTGTTCAACTTGTTTGGGCGATTGTCTTCTGTCCCCGACTCCTTGTGTTTGTGCAAATAAAATTGAGGGTGGGTATGCATACACATCTGAAGGGCTACTGAAGGAAAAGTTCTTGGAAGAGTGTATTACCATTAGCCGCAACCCTCAACGACATCAGTTCTACTGTAAAATCTGCCCCCTTGAAAGAGCAAAGAACGATGATTGTTTAGAACCATGTAAAGGACACTTGAAGAGAAAGTTTGTCAAAGAATGTTGGGTAAAGTGTGGCTGTGTGAAACAGTGTGGCAATAGGGTTGTCCAACGAGGAATCACATTCAATTTGCAGGCGTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGTACCTTAGAGGAGCTGCCAAAAGGTGCATTTGTGTGTGAGTTCGTGGGAGAAATATTAACCGTCAAGGAGTTGCATGAGAGGAACATCCAGTGTGCCCAAAATGGAACATACACATGCCCAGTTCTATTAGATGCAGATTGGGATTCAGGAGATATAAATGATAAAGAAGCTCTTTGCTTGGATGCAGCATCTTATGGGAATGTTGCTAGGTTTATAAATCACAGATGTTTGGACGCGAACTTGATTGAGATCCCAGTTGAAGTTGAAACCTCAGATCATCATTACTTTCATCTTGCTTTCTTCACATCCAGAAAAGTAGCTGCTTTGGAAGAGCTAACTTGGGATTATGGTATTGACTTTGACGACGAGGGTCCTGTCAAGCCATTCTCTTGCAGATGTGGCAGCAAGTTCTGCAGGAAGATGGAGCGATCAAATAGATCCAATAGATCTGCACTTACCGCATGA 2436 0.4245 MAPNPRVAAAYRAMTVLGIKEVKVKPVLKQLLKLYDKNWELIEQENYRVLADAIFEQEEKELQGKKQKNQNNDEGEMEDEEAHMQDESVRPFKRLRLRGQENELSSGGTSSAASPSKMPKVEDDELPQQPQYKALSPHSNRNAETEVHPVPVQVSLVDKGKQPLSSQDAPGGRRVGSERASPSVQLKEPTTEQRIVLSQKNQLPYTHELIIPKDEPIDELVDYDTPMATVNPELPSGRDPPKQHYATRKQGRNGPLMSKRRDVGRGEGIRDSSNEANHEVVTNQERSTIEIASSTSGEVKITMSCSSDLGRSDFRLPSRDQLLKMMEDKCLQSYNITDPNFSIMKLLRDMCDCVLEFRTDSNDDSQEGSEMMTSSLNVLKESKTCDALVIRGNTEALGMHAGMSNGSINIQSSSALAASHISISPLLTTGMNDAVLVTNKARSDFPECEDGKGLEDPIRPHSGNLVVVQQHQLTPDDLRSLHGADDLSKGEENLRIPWVNEITNDFPPPFHYLHQSIAFRDAYVNWCLSKIKCEDYCSTCLGDCLLSPTPCVCANKIEGGYAYTSEGLLKEKFLEECITISRNPQRHQFYCKICPLERAKNDDCLEPCKGHLKRKFVKECWVKCGCVKQCGNRVVQRGITFNLQAFFTSEGKGWGLRTLEELPKGAFVCEFVGEILTVKELHERNIQCAQNGTYTCPVLLDADWDSGDINDKEALCLDAASYGNVARFINHRCLDANLIEIPVEVETSDHHYFHLAFFTSRKVAALEELTWDYGIDFDDEGPVKPFSCRCGSKFCRKMERSNRSNRSALTA 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1701 811 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 809 IPR025776 -
Alju01g1701 811 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 807 - -
Alju01g1701 811 ProSiteProfiles SET domain profile. 641 774 IPR001214 GO:0005515
Alju01g1701 811 Gene3D - 1 60 IPR043017 -
Alju01g1701 811 Pfam Pre-SET motif 488 633 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju01g1701 811 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Alju01g1701 811 MobiDBLite consensus disorder prediction 83 100 - -
Alju01g1701 811 Pfam SET domain 653 774 IPR001214 GO:0005515
Alju01g1701 811 SUPERFAMILY SET domain 493 797 IPR046341 -
Alju01g1701 811 Gene3D SET domain 487 798 IPR046341 -
Alju01g1701 811 MobiDBLite consensus disorder prediction 102 116 - -
Alju01g1701 811 MobiDBLite consensus disorder prediction 230 294 - -
Alju01g1701 811 MobiDBLite consensus disorder prediction 61 125 - -
Alju01g1701 811 MobiDBLite consensus disorder prediction 156 192 - -
Alju01g1701 811 SMART set_7 641 780 IPR001214 GO:0005515
Alju01g1701 811 CDD SET_SETDB-like 508 774 - -
Alju01g1701 811 SMART preset_2 484 625 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju01g1701 811 MobiDBLite consensus disorder prediction 255 274 - -
Alju01g1701 811 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1701 Alju-ChrAlju01 13596433 13601879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1701 617 798 C2H2 Transcription Factor Family AT2G23740 38.220 1.06e-28 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju01g1701 Pre-SET 1.2e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1701 01 13596433 13601879 Alju01g1701 01 13596433 13601879 ECH