Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1687 ATGGCCCGAGCGTATCAGATTGTTTGGCAGGATTATTACATGGGCCCACAAGGGCGCCCTATTGAGGATTGTCCCCTGGGCCCTCGACAAGCAAAATTCGCCGGCCACCAAACCCCGCAGAGAGTGGGAAAGACGCCACACTGCCACGTGGCGAATCACGGCCACCGCCGGGATGGAATCGCTAACCCCGAGGCCGAAGCTGCCTATCAATGGTTCGGAAGTCATAGTCCGGTACGGTCCCACACCTTGTCGGCTTGTCGTTTGGAGCGTCTGTTTGCGGGTGAGTGGTCCCCACCATGGCCATGTCGACTTTTTGGCGCGTACTGCCCAGACCCATCCTTTTATCAAATAAATAAAGCCAAGCTCCATCTTGCCTTCCAATCCATCCACTCTTCAGTCTTCATAACTATCATTTTGTTTTGTGACTTTTTCTTTGGCATAAGTCGGTCTCTTCTTTACCTTGTATTGGCACTTCGAACCATATTGCGAGCGATACAGGGTGGTTCTACTGGTGGATCAATGTCTACGGTGTCAAGGGAAGATAATTTGGTTATGTCTTCGGAGGATTCTTCATGCCCTGACGAATCTGAGCTTGAATTAGGTCTTGGCTTAAGCTTTTCTCGTCGTCCTGGGCTGAAGTCCCAACCACTTTCCACGAATCAATATGCTAGAATTTTAACGGCTAAAGATTTTCCTTCTATGGTTTCTTCTCGTTCTGCAACTTCGCTAGCCTCATCAACCTCCTCCTCATCTTCTTCCTCTTCTTCTCCTTCCTCTGTGACCAGGCCTAACGCCACTGCTGGCATCAAGAGAACTGCCGATTCTGTTGTTGCTACTAATGGCCCCAGTCAGGTTGTGGGATGGCCTCCCGTTGGAGCATATCGAATGAATAGCTTTAACAATCATGCAAAGTCACCTCCCACTAATGTGTTCAACTCAGTGACTGAGAAAAGTATGGACAATGGTACAGAGGCTAGGAAGAGTACTGATAATGGCATCGGTAATAGCAATGTTAGTGCCACAGGTAAAGGACACCTGAAGAGTACCTGGTTTGTGAAGGTAAATATGGATGGGTTGCCAATTGGAAGGAAGGTTGATTTGAGGGCTCACAATTCCTATGAAAGCTTAGCACTTACTTTGGAGGAGATGTTCGATGACCACACTGCAGCTGTTTTGAGTAGAATTGGATCAAATGGGGAAGAACATGGCAGAGCAGAAAGACGGTCAACATTGCTGGATGGATCTTCCAAGTTTGTACTTACTTATGAAGACAAAGATGGAGACTGGATGCTTGTCGGAGATGTACCTTGGCGGATGTTTCTAAGCTCTGTGAGGAGGCTAAGAATCATGAGAACATCTGAGGCCAATGGACTGGCACCAAAATATGAAGAAAAAAACAGCAGACAGAGAAGTTAG 1416 0.476 MARAYQIVWQDYYMGPQGRPIEDCPLGPRQAKFAGHQTPQRVGKTPHCHVANHGHRRDGIANPEAEAAYQWFGSHSPVRSHTLSACRLERLFAGEWSPPWPCRLFGAYCPDPSFYQINKAKLHLAFQSIHSSVFITIILFCDFFFGISRSLLYLVLALRTILRAIQGGSTGGSMSTVSREDNLVMSSEDSSCPDESELELGLGLSFSRRPGLKSQPLSTNQYARILTAKDFPSMVSSRSATSLASSTSSSSSSSSSPSSVTRPNATAGIKRTADSVVATNGPSQVVGWPPVGAYRMNSFNNHAKSPPTNVFNSVTEKSMDNGTEARKSTDNGIGNSNVSATGKGHLKSTWFVKVNMDGLPIGRKVDLRAHNSYESLALTLEEMFDDHTAAVLSRIGSNGEEHGRAERRSTLLDGSSKFVLTYEDKDGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPKYEEKNSRQRS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1687 471 MobiDBLite consensus disorder prediction 243 267 - -
Alju01g1687 471 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 197 457 IPR003311 GO:0005634|GO:0006355
Alju01g1687 471 Pfam AUX/IAA family 198 461 IPR033389 -
Alju01g1687 471 SUPERFAMILY CAD & PB1 domains 345 450 - -
Alju01g1687 471 Gene3D - 345 464 - -
Alju01g1687 471 ProSiteProfiles PB1 domain profile. 349 454 IPR000270 GO:0005515
Alju01g1687 471 MobiDBLite consensus disorder prediction 320 340 - -
Alju01g1687 471 FunFam Auxin-responsive protein 345 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1687 Alju-ChrAlju01 13480541 13484629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1687 352 461 B3 DNA Binding Superfamily AT1G59750 33.636 2.53e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju01g1687 AUX_IAA 8.2e-62 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1687 01 13480541 13484629 Alju01g1687 01 13480541 13484629 ECH