Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1686 ATGATTGATAATGCGCAGTCTCAGAGTAGAGAGTGCAAATGGTGGACAACTGAGAGGTTAAGCAGAGTGAAGAAGAATAAGATGCAACTGAAAATTCTGCTCTTCTTCTGTTACATTTTCTGTTTCTCTTATGGTCTTGCTGCTGTTTTGAATGATGAAGTTTCAGCTCTACTTTCTATAAAAGCAGGTCTTATTGATCCATTGAATAAGCTGCAAGATTGGAAATTGCAGGACAAGGCACCAAGAAAAGATGCAGCGCATTGTAACTGGGTTGGTGTCTCGTGCAATGCTGCTGGAGCTGTTGAGAAGCTTGATCTATCCCACATGAATCTCAGTGGCAGGGTATCCGATGAGATACAAAAGCTACAAAGTCTCACTACTCTAAACTTATGCTGCAATGGATTCTCCACAACATTGCCAAAATCTGTAGCCAACGTCACCACATTGAAAAGTCTTGATGTCAGCCAGAATTTCTTCGTTGGTGATTTTTCATTAGGTCTTGGAAAGGCGTCACGACTTATGTTTTTAAATGCATCCGGTAATGATTTCTCAGGTTTTCTTCCTGAGGACCTTGGAAATGCTTCTTTCTTAGAGACGCTGGATCTCAGAGGCAGCTTCTCCCAAGGGTCTATTCCAAAATCGTTCAATAGATTGCAGAAGTTGAGGTTCCTTGGTCTTTCTGGAAATAATCTCACTGGAGAAATTCCGGGAGATCTGGGACAGCTTTCCTCACTTGAGTATATGATACTCGGGTACAATTCATTTGAGGGTGGGATTCCCAGAGAATTTGGAAATCTCACCAATCTCAAGTATCTTGATATGGCAGAAGGCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTTAACACGGTTTTCTTATACAGAAACAATTTCAGAGGCAGAATCCCTCCTTCTTTGGGCAATCTGTCTTCATTGGTGTTGATGGATTTCTCTGATAACATGTTATCAGGACAAATTCCACCTGAAATTGGTCAACTGAAGCATTTAGAGCTCCTAAATTTCATGAGCAACCTTCTATCTGGTCCTGTGCCTTCTGAAATTGGGGATTTACCTCAATTGAAGGTTCTTGAGCTATGGAACAATTCCTTGTCAGGAACATTGCCAAACCACCTGGGTAAGAGTTCACCATTGCAGTGGCTTGATGTATCATCCAACTCTCTCTCTGGTGTGATTCCAGAAACACTTTGCAGCCAGGGCAATCTCACCAAGCTTATCCTTTTCAGTAATTCCTTCACTGGTCCAATCCCAGTCAACCTATCATCGTGCCCTTCACTTGTTCGTGTTCGAATTCATAACAATTTACTTAATGGGACGATTCCAGTCGGTTTTGGGAAACTTGGGAATCTTGAAAGGTTAGAATTGGCCAACAACAGTCTCACTGGTGAAATTCCTAATGACATTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCTACTATACTTTCCACTCCGAATCTCCAATCATTCTTGGTCTCCCACAACAATTTGGAGGGTGAAATCCCCGACCAATTTCAGGACTGTCCTTCACTTGGTGTTCTTGATCTCTCATCAAATCGTCTCTCTGGAAGCATCCCAGCCAGCGTTGCTTCTTGTCAGAAACTGGTAAACTTGAACCTAAAGAACAACCAATTGACTGGTCAAATCCCGAAGGCATTAGCAAACATGCCTTCGTTGGCCATTCTTGATTTTTCCAACAACTCTCTGACTGGTGAAATACCTGATAGCTTCGGTATTTCTCCTGCTCTGGAGGCTCTCAATGTCTCGTACAACAGGCTTGAGGGTCCTGTCCCAACAAATGGCATGCTGAGAACCATTAACCCAAGTGATCTTGTGGGTAATGCTGGCCTATGTGGTGGCGTCCTTCCTCCATGTGGCCAAAACTCTGCATATGCATTGGAGCATGGAAGCTCACGAGCAAAACACATAATCACAGGATGGGTCATTGGAATATCATCAGTCTTGGCTATTGGAATTGCCATTTTTGTTGCCAGATCTATATACATAAGGTGGTACTCTCATGGCTTCTGCATTGGAGAAAAGATTTATAAGGGTGACAAAAGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAAGCACTGAGATTCTAGCTTGCATCAAGGAAACAAATGTGATTGGAATGGGAGCAACTGGTGTTGTTTATAAGGCTGAAATATCGCAGTCAAATACAATTGTGGCAGTGAAGAAGTTGTGGAAATCAGGATCTGATACTGAAGTAGGAAACAGTGACGACCTTGTTGGGGAGGTGAATCTCTTGGGTAGGCTAAGACATAGAAATATCGTTAGACTGTTAGGATATCTTTGTAATGACGTTGATGTTATGATAGTTTATGAATTTATGTCTAATGGCAACCTTGGAGATGCCTTGCATGGCAAACACGCTGGTAGGTTGCTTGTAGACTGGGCTTCCCGTTATAAGATAGCTCTAGGAGTTGCCCAAGGGCTTACTTATCTTCATCATGACTGTCATCCGCCGGTCATCCACCGAGACATCAAGTCAAATAACATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTAGCCAAAATGATGATCAGGAAGAACGAAACAGTCTCCATGATTGCTGGGTCCTACGGCTACATTGCTCCAGAATATGGATATACCTTGAAGGTGGATGAAAAGATTGACACATACAGCTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGGAAGAGGCCACTGGATTCTGAGTTTGGAGAATCTGTGAACATTGTTGAGTGGATTAGGACGAAGATTAGAGACAACAAGCCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACTGCAGGCATGTTGTGGAGGAGATGCTTTTAGTTCTTAGAATAGCACTTCTTTGCACTGCCAAGCTACCAAAAGACAGACCCTCCATGACAGATGTGATAATGATGCTTGAAGAGGCACAGCCTCGGAGTAAAAGTGATAGCAACAATCAAAAACAAGAAGCTAATAATAAGATGATGCCAGTTTTTAGCACATCATCACCAGTTAGTGGCCTTGTGTAG 3135 0.4262 MIDNAQSQSRECKWWTTERLSRVKKNKMQLKILLFFCYIFCFSYGLAAVLNDEVSALLSIKAGLIDPLNKLQDWKLQDKAPRKDAAHCNWVGVSCNAAGAVEKLDLSHMNLSGRVSDEIQKLQSLTTLNLCCNGFSTTLPKSVANVTTLKSLDVSQNFFVGDFSLGLGKASRLMFLNASGNDFSGFLPEDLGNASFLETLDLRGSFSQGSIPKSFNRLQKLRFLGLSGNNLTGEIPGDLGQLSSLEYMILGYNSFEGGIPREFGNLTNLKYLDMAEGNLGGEIPAELGNLKLLNTVFLYRNNFRGRIPPSLGNLSSLVLMDFSDNMLSGQIPPEIGQLKHLELLNFMSNLLSGPVPSEIGDLPQLKVLELWNNSLSGTLPNHLGKSSPLQWLDVSSNSLSGVIPETLCSQGNLTKLILFSNSFTGPIPVNLSSCPSLVRVRIHNNLLNGTIPVGFGKLGNLERLELANNSLTGEIPNDIASSTSLSFIDFSRNNLHSSLPSTILSTPNLQSFLVSHNNLEGEIPDQFQDCPSLGVLDLSSNRLSGSIPASVASCQKLVNLNLKNNQLTGQIPKALANMPSLAILDFSNNSLTGEIPDSFGISPALEALNVSYNRLEGPVPTNGMLRTINPSDLVGNAGLCGGVLPPCGQNSAYALEHGSSRAKHIITGWVIGISSVLAIGIAIFVARSIYIRWYSHGFCIGEKIYKGDKRWPWRLMAFQRLNFTSTEILACIKETNVIGMGATGVVYKAEISQSNTIVAVKKLWKSGSDTEVGNSDDLVGEVNLLGRLRHRNIVRLLGYLCNDVDVMIVYEFMSNGNLGDALHGKHAGRLLVDWASRYKIALGVAQGLTYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYTLKVDEKIDTYSYGVVLLELLTGKRPLDSEFGESVNIVEWIRTKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRIALLCTAKLPKDRPSMTDVIMMLEEAQPRSKSDSNNQKQEANNKMMPVFSTSSPVSGLV 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1686 1044 SUPERFAMILY Protein kinase-like (PK-like) 727 1009 IPR011009 -
Alju01g1686 1044 FunFam MDIS1-interacting receptor like kinase 1 817 1027 - -
Alju01g1686 1044 FunFam Leucine-rich repeat receptor protein kinase EMS1 307 390 - -
Alju01g1686 1044 PANTHER RECEPTOR-LIKE PROTEIN 55 380 1012 - -
Alju01g1686 1044 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 50 205 - -
Alju01g1686 1044 Pfam Protein kinase domain 734 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1686 1044 Pfam Leucine rich repeat 556 615 IPR001611 GO:0005515
Alju01g1686 1044 SMART LRR_typ_2 530 554 IPR003591 -
Alju01g1686 1044 SMART LRR_typ_2 362 386 IPR003591 -
Alju01g1686 1044 SMART LRR_typ_2 314 338 IPR003591 -
Alju01g1686 1044 SMART LRR_typ_2 578 602 IPR003591 -
Alju01g1686 1044 SMART LRR_typ_2 218 242 IPR003591 -
Alju01g1686 1044 SMART LRR_typ_2 458 482 IPR003591 -
Alju01g1686 1044 SMART LRR_typ_2 122 145 IPR003591 -
Alju01g1686 1044 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 206 306 - -
Alju01g1686 1044 Gene3D Ribonuclease Inhibitor 48 205 IPR032675 -
Alju01g1686 1044 MobiDBLite consensus disorder prediction 1010 1044 - -
Alju01g1686 1044 Pfam Leucine Rich Repeat 460 479 IPR001611 GO:0005515
Alju01g1686 1044 ProSiteProfiles Protein kinase domain profile. 732 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1686 1044 MobiDBLite consensus disorder prediction 1013 1044 - -
Alju01g1686 1044 Gene3D Ribonuclease Inhibitor 316 404 IPR032675 -
Alju01g1686 1044 Gene3D Transferase(Phosphotransferase) domain 1 817 1036 - -
Alju01g1686 1044 Gene3D Phosphorylase Kinase; domain 1 732 816 - -
Alju01g1686 1044 SUPERFAMILY RNI-like 283 620 - -
Alju01g1686 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Alju01g1686 1044 Gene3D Ribonuclease Inhibitor 206 310 IPR032675 -
Alju01g1686 1044 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 391 651 - -
Alju01g1686 1044 SUPERFAMILY L domain-like 50 329 - -
Alju01g1686 1044 SMART serkin_6 732 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1686 1044 Pfam Leucine rich repeat N-terminal domain 51 96 IPR013210 -
Alju01g1686 1044 ProSitePatterns Protein kinases ATP-binding region signature. 738 762 IPR017441 GO:0005524
Alju01g1686 1044 Gene3D Ribonuclease Inhibitor 405 651 IPR032675 -
Alju01g1686 1044 FunFam MDIS1-interacting receptor like kinase 1 732 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1686 Alju-ChrAlju01 13473229 13477921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1686 28 1044 Receptor kinase-like Gene Family AT1G08590 58.149 0.0 1150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju01g1686 Pkinase 2e-46 CL0016