Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1680 ATGGCAATCTCCCAATTGCTCGATAAAATCTCTTCCTCATCATCCTTGCCATCGAGATCGCCGAACTCCCTTTTGACAACGATCATAGGACTGCCCGTTTTGGAATTAGCCGCAATATGCGTCAACTTAACTATTCTTCTTGTGTTTCTCCTGGTAATCTCAGCGAGGCAGATATTCGTGTGTGTTGGTCGAATTCGAATAAGCAAGGAAAATACGAATGGCGATCCAAATCCAATTCGTCGTAGTTATATCGACAGGAACACACACAATGTTAGAATCCGTACGAGATTCAAATTGGCATTGCTCTGTTGTTTCTATGTGCTCTTTGTTCAAGTTCTGGTGTTAGGATTTGATGCTGCTGCTTTGATCAGAGAATCGACTAATGGGAACACTGTGAACTGGTGGCTTCTTTCTTTGCCATCCGCGCAGGGTTTAGCTTGGTTTGTAATAAGCTTCTCTGCTTTGCATTGCAAACTCAACTTGTCTGAGAAGTTTCCGTTTTTGTTGAGGATTTGGTGGTTGGTCTCATTTGCAATTTGCTTGTGCACTTTGTACCTTGATGGGAGAGGACTTGTAGTGGAAGGCTCAAAACATCTTTCTTCTCATGTTGTGGCAAATTTTGCTGCCACTCCAGCTCTTGCTTTCCTGTGCGTTGTTGCAATTAGAGGTGTTACTGGCATAAAAGTTCGTAGAAACTCTGATCTTCAAGAGCCATTACTTGCTGAAGAAGAAGAAGAAGAAGCAGGTTGTCTCAAGGTTACTCCTTATAGTGATGCTGGGATTTTTAGCTTAGCCACTCTCTCTTGGCTCAACCCTCTTCTCTCAATTGGGGCTAAGAGACCGCTTGAGCTCAAGGACATTCCCCTTCTTGCTCCAAAAGATCGTGCTAAAACTAATTATAGGATTTTGAACTCTAACTGGGAGAGATTGAAGGCTGAAAATCCTTCAAAGCAGCCTTCATTAGCTTGGGCAATTCTCAAGTCTTACTGGAAGGAGGCAGCTTGTAATGCCATCTTTGCTGGTATGAATACTCTAGTGTCGTATGTAGGTCCATACATGATAAGTTACTTCGTTGATTACTTAGGTGGTAAAGAGACATTCCCGTATGAAGGGTATATCCTCGCGGGGACATTTTTTGCTGCAAAGCTTGTGGAGACCTTGACAACAAGACAATGGTATTTGGGGGTGGACATCTTGGGTATGCACGTCCGGTCGGCTCTAACAGCAATGGTATATCGTAAGGGACTCAGGCTCTCAAGCTCGGCCAAGCAGAGTCACACAAGTGGGGAGATTGTTAACTACATGGCTGTGGATGTTCAGAGGGTGGGGGATTTCTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTTCAAATCATTCTCGCCCTTGCAATTTTGTACAAGAATGTTGGACTTGCTTCAATTGCTACATTGATTGCTACAATCATTTCCATTGTTGTTACTATTCCTGTGGCTAGGATACAAGAAAATTTTCAAGACAAATTAATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCTGAATGCTTGAGAAATATGAGGATCCTCAAGTTGCAAGCTTGGGAAGATCGATATCGAATACAGTTGGAAGAAATGCGTGGAGTAGAGTTCAAGTGGCTACGTAAAGCCCTCTATTCTCAGGCTTTCATCACTTTTATCTTTTGGAGCTCTCCTATATTTGTTTCGGCGATCACTTTTGGCACTTCAATATTGTTGGGAGATCAGTTGACTGCAGGAGCAGTTCTCTCTGCTCTCGCTACTTTCAGGATCCTTCAAGAGCCTTTGAGGAATTTTCCTGACTTGGTATCAACAATGGCCCAGACAAAAGTTTCTCTTGATCGCATATCTAGTTTCCTGCAAGAGGAAGAATTGCAAGAGGATGCAACTACCGTCTTGCCACGAGGAACTTCTGACATTGCCATTGAGATTAAGGACGGATTCTTTGGCTGGGACCCTTCTTCTAGGCCTACTCTTTCAGGGATACAAATGCAAGTGAAAAAGGGCATGCGTGTGGCGGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTAAGAGTGTGTGGTTCAGAAGCATATGTGTCCCAATCACCATGGATACAATCAGGAAATATTGAAGAAAATATCCTTTTTGGAAGCCCCATGGATAAAGCAAAGTACAAGAGAGTTCTTCATGCTTGTTCACTGAAGAGGGACTTGGAACTTTTCTCTCATGGAGACCAAACAATTATAGGCGATCGAGGTATAAACTTGAGTGGAGGCCAGAAACAGCGGGTGCAGCTTGCACGAGCTCTTTATCAAGATGCTGATATTTATCTCCTTGATGATCCCTTCAGTGCAGTTGATGCTCATACTGGATCAGAACTGTTTAACGAATACATATTGACAGCACTAGCAGATAAAACAGTTATTTTTGTGACCCATCAAGTGGAATTTCTTCCTTCAGCTGATTTGATACTGGTTCTTAAAGAAGGCCGCATCATACAGGCAGGAAAATATGATGATCTTTTACAAGCTGGAACAGATTTTAAAACTCTAGTTTCAGCTCATCATGAAGCCATTGAGGCTATGGATATTCCTAATCATTCAGAAGATTCAGATGAAAATGTGTCATTGGAGTTGGAGGCGTCTGTTATGGCCAGTAAAACGTCCATCATATCTGCCAATGATATTGAAACTCTAGCAAAGGAAATGCAGGAGGGTTCATCAGTTTCAGATCAGAAAGCAATCAAGGAGAAGAAGAAGAAAGCGAAACGGTCAAGGAAAAAACAGCTTGTTCAGGAGGAGGAGAGGGTAAGAGGTAGAGTCAGCATGAGGGTGTACTGGTCATACATGGCTGCAGCATATAAAGGCTTACTGATTCCACTCATAATCATTGCACAAGCATTATTTCAGTTTCTTCAAATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGACCAACCCAGAGTAACTCCTATGGTTCTTCTTCTGGTGTACATGGCTCTTGCTTTTGGAAGCTCTTGGTTTATATTTGTAAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCTGCTGCGCAGAAACTTTTTATAAATATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCCACGCCAGCTGGAAGGATATTGAATCGTGTATCGGTTGATCAGAGTGTTGTGGATCTTGACATTCCTTTTAGACTAGGAGGATTTGCTTCGACAACGATACAACTTATTGGCATCGTTGGTGTGATGACAAAGGTTACCTGGCAAGTTTTGCTTCTGGTTGTCCCAATGGCTGTGGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCTTCAAGGGAGCTGGTTCGTATAGTAAGCATCCAGAAATCTCCTGTGATAAACCTTTTTGGTGAATCAATTGCTGGGGCAGCTACTATCAGGGGTTTTGGACAAGAAAAAAGGTTTATGAAGAGAAACCTCTATCTTCTGGACTCTTTTGCTCGGCCATTCTTCTGCAGTCTCGCAGCGATTGAGTGGCTCTGCCTGCGTATGGAATTGTTGTCAACCTTTGTATTTGCTTTCTGCATGATATTACTAGTGAGCTTTCCACATGAAAGTATTGACCCTAGCATGGCTGGACTTGCTGTGACGTATGGCTTGAATTTAAATGCACGCCTATCACGGTGGATCCTTAGCTTTTGCAAACTTGAGAATAAAATAATTTCAATTGAAAGGATTTATCAATACAGCCAAATTCCCAGTGAAGCACCTACTATTATTGAAGACACTCGCCCACCACCCACATGGCCTGAGAATGGGACAGTCAGTATAATTGATTTGAAGGTTCGTTACAAGGAAAGTCTTCCATTGGTGCTTCGTGGAATATCATGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGTACTGGCAGTGGCAAATCTACTTTGATACAAGCGTTGTTTCGATTGGTTGAACCTTCAAGTGGGAGTATCCTTATAGACGGCATTAATATTACAAGCATTGGTCTTCATGACCTTCGAAGCCGTCTCAGCATCATACCTCAAGATCCAACCTTAGTTGAAGGGACTATACGAGGCAATCTTGATCCTCTTGAAGAGCACTCTGATCAAGAGATTTGGGAGGCACTAGATAAGTCTCAGCTTGGAGAGATTATTCGTCAGAAAGATGAAAAGCTTGATACGCAAGTGCTTGAAAATGGAGATAATTGGAGCGTAGGGCAGCGACAACTTGTGGCGCTGGGGCGGGCTTTATTGAAACAGTCAAGGATACTTGTACTTGATGAAGCAACAGCATCAGTTGATACAGCCACTGATAATCTTGTACAGAAGATTATTCGGACAGAGTTTAGAGACTGCACTGTCTGCACTATCGCACATCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTGGTCCTCAGTGATGGTCGAGTGGCAGAGTTTGACACGCCAACCCGACTATTAGAGGATAAGTCCTCCATGTTTCTGAAGTTGGTGACAGAGTATTCATCAAGGTCAAGTGGCATACCAGATTTTTGA 4623 0.4285 MAISQLLDKISSSSSLPSRSPNSLLTTIIGLPVLELAAICVNLTILLVFLLVISARQIFVCVGRIRISKENTNGDPNPIRRSYIDRNTHNVRIRTRFKLALLCCFYVLFVQVLVLGFDAAALIRESTNGNTVNWWLLSLPSAQGLAWFVISFSALHCKLNLSEKFPFLLRIWWLVSFAICLCTLYLDGRGLVVEGSKHLSSHVVANFAATPALAFLCVVAIRGVTGIKVRRNSDLQEPLLAEEEEEEAGCLKVTPYSDAGIFSLATLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYRILNSNWERLKAENPSKQPSLAWAILKSYWKEAACNAIFAGMNTLVSYVGPYMISYFVDYLGGKETFPYEGYILAGTFFAAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDFSWYLHDMWMLPLQIILALAILYKNVGLASIATLIATIISIVVTIPVARIQENFQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAITFGTSILLGDQLTAGAVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISSFLQEEELQEDATTVLPRGTSDIAIEIKDGFFGWDPSSRPTLSGIQMQVKKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSEAYVSQSPWIQSGNIEENILFGSPMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFNEYILTALADKTVIFVTHQVEFLPSADLILVLKEGRIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPNHSEDSDENVSLELEASVMASKTSIISANDIETLAKEMQEGSSVSDQKAIKEKKKKAKRSRKKQLVQEEERVRGRVSMRVYWSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPRVTPMVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFINMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTKVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPVINLFGESIAGAATIRGFGQEKRFMKRNLYLLDSFARPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHESIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDTRPPPTWPENGTVSIIDLKVRYKESLPLVLRGISCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSSGSILIDGINITSIGLHDLRSRLSIIPQDPTLVEGTIRGNLDPLEEHSDQEIWEALDKSQLGEIIRQKDEKLDTQVLENGDNWSVGQRQLVALGRALLKQSRILVLDEATASVDTATDNLVQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPTRLLEDKSSMFLKLVTEYSSRSSGIPDF 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1680 1540 Gene3D - 1277 1530 IPR027417 -
Alju01g1680 1540 Pfam ABC transporter 1311 1459 IPR003439 GO:0005524
Alju01g1680 1540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 337 614 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1680 1540 CDD ABCC_MRP_domain1 648 847 - -
Alju01g1680 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 644 869 IPR027417 -
Alju01g1680 1540 Gene3D - 643 876 IPR027417 -
Alju01g1680 1540 FunFam ABC transporter C family member 10 317 630 - -
Alju01g1680 1540 FunFam ABC transporter C family member 5 938 1275 - -
Alju01g1680 1540 CDD ABCC_MRP_domain2 1292 1512 - -
Alju01g1680 1540 MobiDBLite consensus disorder prediction 926 946 - -
Alju01g1680 1540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 977 1247 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1680 1540 FunFam ABC transporter C family member 3 1277 1529 - -
Alju01g1680 1540 Coils Coil 293 313 - -
Alju01g1680 1540 SUPERFAMILY ABC transporter transmembrane region 962 1274 IPR036640 GO:0005524|GO:0016020
Alju01g1680 1540 ProSitePatterns ABC transporters family signature. 772 786 IPR017871 GO:0005524|GO:0016887
Alju01g1680 1540 Gene3D ABC transporter type 1, transmembrane domain 305 631 IPR036640 GO:0005524|GO:0016020
Alju01g1680 1540 Gene3D ABC transporter type 1, transmembrane domain 936 1275 IPR036640 GO:0005524|GO:0016020
Alju01g1680 1540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 648 870 IPR003439 GO:0005524
Alju01g1680 1540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1294 1528 IPR003439 GO:0005524
Alju01g1680 1540 Pfam ABC transporter 665 799 IPR003439 GO:0005524
Alju01g1680 1540 SUPERFAMILY ABC transporter transmembrane region 323 630 IPR036640 GO:0005524|GO:0016020
Alju01g1680 1540 CDD ABC_6TM_ABCC_D1 335 622 IPR044746 GO:0140359
Alju01g1680 1540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1284 1524 IPR027417 -
Alju01g1680 1540 FunFam ABC transporter C family member 5 633 879 - -
Alju01g1680 1540 CDD ABC_6TM_ABCC_D2 975 1269 IPR044726 GO:0140359
Alju01g1680 1540 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 256 1531 - -
Alju01g1680 1540 SMART AAA_5 674 855 IPR003593 GO:0016887
Alju01g1680 1540 SMART AAA_5 1320 1505 IPR003593 GO:0016887
Alju01g1680 1540 Pfam ABC transporter transmembrane region 977 1219 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1680 1540 Pfam ABC transporter transmembrane region 338 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1680 Alju-ChrAlju01 13447166 13453680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1680 628 863 Calmodulin-binding Proteins AT2G36910 31.008 2.43e-21 99.8