LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g1665	ATGATGGAGAGTCTGTTTCGCCTAGTTGATCATGAAGACTTGTTCTCACGTCGCTGCATTTGGGTGAACGGCCCTGTGATCGTCGGAGCTGGCCCCTCCGGCCTAGCCACGGCGGCTTGTCTCAGAGAACAAGGAGTCCCATTCATGGTTCTCGAGCGAGCCGATTGCATAGCTTCTCTGTGGCAGAAGAGAACCTACGACAGGCTCAAGCTTCACCTTCCAAAGCAATTCTGTCAGCTTCCCAAAGTTCCATTCCCAGATAACTTCCCTGAGTACCCAACAAAGCGACAATTCATCGACTACCTCGAATCATACGCCAAGCATTTCGAGATCAACCCACGATTCAACGAGTGCGTTCAATCCGCTAGGTACGATGAGACCTGCGGATTGTGGCGGGTCAAGACCGCTTCCACCGTCGGCTCCTCCTCTCGAACTGAGGTCGAGTACATTTGCCGGTGGCTCGTGGTGGCCACCGGCGAGAATGCCGAGTGTGTTATGCCTGATATTCAAGGCTTGGGTGAATTCAAAGGTGAAATCATTCATGCCTGTGATTACAAGTCAGGGGAAAGTTTCAGGGGAAAGAAAGTGCTCGTCGTGGGGTGTGGCAATTCCGGCATGGAGCTATCTCTCGATCTCTGTAACCACAATGCGTCACCTTCAATGGTTGTTCGTAACTCGGTTCATGTGTTACCCAGAAAGATCTTCGGAAAATCAACGTTCGAATTGGCCGTTACGCTGTTGAAGTGGCTACCTCTCTGGTTCGTTGACAAGCTCCTATTGGTTCTTGCATGGTTGGTGCTCGGCGACGTTGAGAAATACGGTCTAAAACGGCCATCGACAGGCCCACTGGAGCTGAAAAACACACAGGGGAAGACCCCTGTTTTGGACATTGGAACATTGGAGAAGATTAGATCCGGAGACATACAAGTTGTACCAGCGATCAAGAGGTTTAACAATCACCAAGTTGAGCTAGTCAATGGTGAAAATCTTGATATTGATGCAGTTTTACTAGCCACAGGATATCGCAGCAATGTCCCTTCATGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATTCCCAAAGAGGCCATTCCCACATGGATGGAAAGGAAGTGTTGGTCTTTATGCAGTTGGGTTCACAAGGAGAGGGCTATCTGGTGCTTCATCTGATGCCATGAATATTGCTCAAGACATAGGCCAAGTTTGGAAGGAAGAGACTAAGCAAAAGAAGCACCGACCTACTGCTTGCCATAGACGATGCATTTCCCAGTTCTGA	1278	0.4922	MMESLFRLVDHEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKVPFPDNFPEYPTKRQFIDYLESYAKHFEINPRFNECVQSARYDETCGLWRVKTASTVGSSSRTEVEYICRWLVVATGENAECVMPDIQGLGEFKGEIIHACDYKSGESFRGKKVLVVGCGNSGMELSLDLCNHNASPSMVVRNSVHVLPRKIFGKSTFELAVTLLKWLPLWFVDKLLLVLAWLVLGDVEKYGLKRPSTGPLELKNTQGKTPVLDIGTLEKIRSGDIQVVPAIKRFNNHQVELVNGENLDIDAVLLATGYRSNVPSWLQEGEFFSKNGFPKRPFPHGWKGSVGLYAVGFTRRGLSGASSDAMNIAQDIGQVWKEETKQKKHRPTACHRRCISQF	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g1665	425	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	24	46	-	-
	Alju01g1665	425	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	191	215	-	-
	Alju01g1665	425	Pfam	Flavin-binding monooxygenase-like	27	346	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Alju01g1665	425	FunFam	Flavin-containing monooxygenase	25	408	-	-
	Alju01g1665	425	SUPERFAMILY	FAD/NAD(P)-binding domain	194	398	IPR036188	-
	Alju01g1665	425	SUPERFAMILY	FAD/NAD(P)-binding domain	26	305	IPR036188	-
	Alju01g1665	425	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	26	419	-	-
	Alju01g1665	425	PRINTS	FAD-dependent pyridine nucleotide reductase signature	195	213	-	-
	Alju01g1665	425	PRINTS	FAD-dependent pyridine nucleotide reductase signature	25	44	-	-
	Alju01g1665	425	Gene3D	-	25	409	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g1665	Alju-ChrAlju01	13342221	13343808	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju03g3308	03	57103989	57111734	Alju01g1665	01	13342221	13343808	CCT
	Alju01g1665	01	13342221	13343808	Alju01g1665	01	13342221	13343808	ECH