Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1646 ATGGCCGGCAAAGGAGAGGGTCCTGCTATTGGGATAGATCTGGGCACGACGTATTCGTGCGTTGGAGTCTGGCAACATGACCGCGTCGAGATTATTGCCAACGATCAGGGTAACCGGACTACGCCGTCTTACGTTGGATTCACCGACTCTGAGCGTTTGATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTGATGCCAAGAGACTGATTGGTCGTAGATTCAGTGACACATCTGTTCAGGATGACATGAAGTTATGGCCTTTTAAGGTCATTGCCGGCCCTGCTGACAAGCCAATGATCTCAGTCAACTACAAGGGTGAAGAGAAGCAATTTGCTGCGGAAGAAATATCTTCAATGGTTCTGATGAAGATGCGTGAGATTGCTGAGGCCTACCTTGGCTCCACAATCAAGAACGCTGTTGTTACTGTCCCTGCTTACTTCAATGACTCCCAGCGTCAAGCTACCAAGGATGCTGGTGTTATTGCTGGCCTTAATGTCATGAGAATTATCAACGAGCCTACTGCTGCTGCCATTGCATATGGTCTTGACAAGAAGGCAACAAGTGTTGGCGAGAAGAATGTCTTGATTTTTGATCTTGGTGGTGGTACATTTGATGTTTCTTTGCTCACTATTGAAGAGGGTATCTTTGAGGTGAAAGCCACAGCCGGGGACACTCATCTTGGAGGTGAGGATTTTGATAACAGGATGGTTAACCACTTTGTGCTGGAATTCAAGAGAAAGCACAAGAAGGACATCAGTGGCAACCCCAGAGCACTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCTAAAAGAACTCTATCTTCCACCGCACAGACCACCATTGAAATTGATTCCTTGTATGAGGGAATTGATTTCTATGCCCCCATTACTCGCGCCAGATTTGAGGAGCTCAATATGGATCTCTTCAGAAAGTGCATGGAACCAGTTGAGAAATGTTTAAGGGATGCTAAGATGGATAAGAGGAGTGTTCATGATGTTGTTCTTGTCGGTGGATCCACTAGAATTCCCAAAGTTCAGCAACTTCTCCAAGATTTCTTTAATGGGAAGGAGCTCTGTAAGAGCATCAATCCTGATGAAGCTGTTGCATATGGTGCTGCTGTCCAGGCCGCAATCTTAAGTGGTGAAGGCAATGAGAAGGTCCAGGATCTTCTGCTTTTGGATGTAACCCCACTTTCACTTGGTTTGGAGACTGCCGGTGGGGTGATGACTGTGCTGATCCCCAGGAACACTACTATCCCAACAAAGAAGGAGCAGGTTTTCTCAACCTATTCTGACAACCAGCCTGGTGTGTTGATCCAAGTCTATGAAGGCGAGAGGACCCGAACCCGTGATAACAACTTGCTGGGTAAGTTTGAACTGTCTGGCATTCCTCCTGCTCCTAGAGGAGTCCCACAAATTACAGTGTGCTTTGACATTGATGCCAATGGTATCCTGAATGTTTCTGCTGAGGATAAAACTACTGGTCAAAAGAACAAGATCACCATCACAAATGACAAGGGTAGATTATCAAAGGAAGAGATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCTGAGGATGAAGAGCACAAGAAGAAGGTAGAGGCAAAGAACACGTTGGAGAACTATGCATACAACATGAGGAACACAGTGAAGGACGAGAAGATTGGAGGAAAACTTGATCCAGCTGACAAGAAGAAGATCGAGGATGCCATTGAGCAAGCTATCAACTGGCTGGACGGCAACCAGCTTGCAGAGGCAGACGAGTTTGAAGATAAGATGAAGGAATTGGAGAGCATATGCAACCCCATCATCGCCAAGATGTACCAGGGTGGTGCTGGTCCTGATATGGGTGCTTCTATGGATGATGATGCACCTCCATCTGGCGCAAGTGGTGCTGGCCCCAAGATTGAGGAAGTCGACTAA 1950 0.4708 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDTSVQDDMKLWPFKVIAGPADKPMISVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVLEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNTLENYAYNMRNTVKDEKIGGKLDPADKKKIEDAIEQAINWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDMGASMDDDAPPSGASGAGPKIEEVD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1646 649 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Alju01g1646 649 FunFam Heat shock protein 70 10 196 - -
Alju01g1646 649 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 36 48 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 337 353 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 396 415 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 477 493 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 146 166 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 209 219 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 369 389 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 8 21 - -
Alju01g1646 649 PRINTS 70kDa heat shock protein signature 58 66 - -
Alju01g1646 649 FunFam Heat shock 70 kDa protein 197 260 - -
Alju01g1646 649 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Alju01g1646 649 Gene3D - 545 619 IPR029048 -
Alju01g1646 649 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Alju01g1646 649 FunFam Heat shock 70 kDa 235 318 - -
Alju01g1646 649 Gene3D - 192 366 - -
Alju01g1646 649 FunFam Heat shock 70 kDa 391 545 - -
Alju01g1646 649 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Alju01g1646 649 MobiDBLite consensus disorder prediction 619 649 - -
Alju01g1646 649 FunFam Heat shock 70 kDa protein 539 649 - -
Alju01g1646 649 FunFam Heat shock 70 kDa protein 71 126 - -
Alju01g1646 649 Gene3D Actin; Chain A, domain 4 235 318 - -
Alju01g1646 649 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Alju01g1646 649 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Alju01g1646 649 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Alju01g1646 649 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Alju01g1646 649 Gene3D - 71 126 - -
Alju01g1646 649 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Alju01g1646 649 Coils Coil 521 541 - -
Alju01g1646 649 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Alju01g1646 649 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Alju01g1646 649 Gene3D - 10 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1646 Alju-ChrAlju01 13227791 13230241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1646 1 649 Calmodulin-binding Proteins AT3G12580 92.166 0.0 1221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1646 01 13227791 13230241 Alju03g2728 03 53168824 53171306 CCT
Alju01g1646 01 13227791 13230241 Alju03g2728 03 53168824 53171306 ECH
Alju01g1646 01 13227791 13230241 Alju01g1646 01 13227791 13230241 ECH
Alju03g2728 03 53168824 53171306 Alju01g1646 01 13227791 13230241 ECH