Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1636 ATGAAGCCTTCTCTTTTGTCATATTGGTGGATCCTCTCGCAACTACGAAGCACCCAAGAAAAAGGAGGCCGAAGGAAGGGAGAGAGGATCGTTTCACTCTATTCTGATCAGATCTTCCTATTTATCTCATTTCCTTTCGGCGTTCGAGCATCTAATTCAGATCCATCGGATAGGATATTGATGGCTGCAGCGAGGCGGCTCCGGGACCTGCAAGCTCAACCGGGGAACAGGATCTGCGTTGATTGTGCTCAAAAGAACCCCCAATGGGCTTCCGTTTCCTATGGAGTTTTCATGTGCTTAGAATGCTCCGGCAAGCACCGTGGCCTCGGTGTCCACATCTCCTTTGTCCGATCCGTTACGATGGATTCCTGGTCCGAAATTCAGATCAAGAAGATGGAAGCAGGTGGTAATGAGAAACTCAACGCGTTCCTTGCCCAGTATGGTATCGCCAAGGAGACCGATATTGTGGCCAAGTACAATACTAATGCGGCTAGCATTTATAGGGATCGAATTCAGGCCCTTGCCGAGGGACTACCGTGGCGGGATCCACCGGTTGTTAAGGAGAACCTTGGCTCTGGGAAGAGTAAACCTCCGTTGCCCAAAAGTGGAAACGATGGAGGCTGGGATAGCTGGGATAACGATGACGGGGCCAGATCTCCCCATGACTTCAAGCGCAACATGTCTACAGGGGATGTAAGGGGGTTCAATGGAGGTTCGACTGGTAGCAGGCCCTCGAGATCGAGGTCGACGGAAGATATCTACACGCGGTCGCAATTGGAGGCTTCCGCTGCCAACAAAGGCAACTTTTTCGCCCGCAAGATTGCAGAGAACGAATCACGACCCGAAGGGATTCCACCCTCGCAGGGAGGCAAGTACGTTGGATTCGGATCTGGTTACGCACCTCCCCGGGTGAATAACCAACAAAACGATGTCTTCTCAGTCATGTCTCAGGGATTTGGTAAATTGTCTTTGGTTGCTACCTCTGCGGCTCAGTCTGCTGCTAATGTTGTTCAGGCTGGCACTAAAGAGATCGCTACCAAGGTAAAGGATGGTGGCTATGATTACAGAGTCAATGAAACTGTCAATGTTGTCTCCCAGAAGACATCAGAGATCGGACAGAAGACGTGGGGGATTATGAAGGGGGTCATGGCTTTGGCTTCGCAGAAGGTTGAGGAGTACACCAGAGATAACCCCAACTGGACAACTGATAATTGGCAGCAAAATGAAAATGAGAGAAATGGCTATTATCAAGAATATAGTCAAGAGAATAAAGAAAGAACCAGCTAA 1287 0.4965 MKPSLLSYWWILSQLRSTQEKGGRRKGERIVSLYSDQIFLFISFPFGVRASNSDPSDRILMAAARRLRDLQAQPGNRICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNEKLNAFLAQYGIAKETDIVAKYNTNAASIYRDRIQALAEGLPWRDPPVVKENLGSGKSKPPLPKSGNDGGWDSWDNDDGARSPHDFKRNMSTGDVRGFNGGSTGSRPSRSRSTEDIYTRSQLEASAANKGNFFARKIAENESRPEGIPPSQGGKYVGFGSGYAPPRVNNQQNDVFSVMSQGFGKLSLVATSAAQSAANVVQAGTKEIATKVKDGGYDYRVNETVNVVSQKTSEIGQKTWGIMKGVMALASQKVEEYTRDNPNWTTDNWQQNENERNGYYQEYSQENKERTS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1636 428 MobiDBLite consensus disorder prediction 276 296 - -
Alju01g1636 428 Gene3D Arf GTPase activating protein 53 183 IPR038508 -
Alju01g1636 428 MobiDBLite consensus disorder prediction 211 228 - -
Alju01g1636 428 MobiDBLite consensus disorder prediction 182 258 - -
Alju01g1636 428 PRINTS HIV Rev interacting protein signature 76 95 IPR001164 GO:0005096
Alju01g1636 428 PRINTS HIV Rev interacting protein signature 116 137 IPR001164 GO:0005096
Alju01g1636 428 PRINTS HIV Rev interacting protein signature 95 112 IPR001164 GO:0005096
Alju01g1636 428 SMART arf_gap_3 64 180 IPR001164 GO:0005096
Alju01g1636 428 MobiDBLite consensus disorder prediction 395 428 - -
Alju01g1636 428 MobiDBLite consensus disorder prediction 232 258 - -
Alju01g1636 428 SUPERFAMILY ArfGap/RecO-like zinc finger 65 164 IPR037278 -
Alju01g1636 428 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 61 426 IPR044519 GO:0005096|GO:0016192
Alju01g1636 428 Pfam Putative GTPase activating protein for Arf 65 154 IPR001164 GO:0005096
Alju01g1636 428 CDD ArfGap_ArfGap1 63 177 - -
Alju01g1636 428 ProSiteProfiles ARF GTPase-activating proteins domain profile. 64 144 IPR001164 GO:0005096
Alju01g1636 428 FunFam ADP-ribosylation factor GTPase-activating protein 58 189 - -
Alju01g1636 428 MobiDBLite consensus disorder prediction 395 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1636 Alju-ChrAlju01 13150825 13155461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1636 65 147 C2H2 Transcription Factor Family AT4G05330 51.190 3.76e-24 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1636 01 13150825 13155461 Alju01g1636 01 13150825 13155461 ECH