Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1610 ATGGCTTTGACCGCTGCCATTTCTCTCCCTCTCACATCCTCCCGTCGACCGTCCAGCGCCGTCCTTCGTCCTTCAACATCCTTACACGCTTTCCCTTCCGGTTTTGCGGTAACTACCTATTCCGTTAAGTGCCCTAGTTCTCGCATCATGGCTTCTTCAGCGAGCATTCAAATCCCCGTCATAAGTTCGTCCACTTCATTCTTGGACAGAAAAGAGACTGGGTTTCTTCATTTCGCCAAGTATCACGGCCTCGGCAATGACTTCATTGTGGTTGATAATAGAGATTGTCTGGAGCCCAAGATCAGCCCAGATAAAGCTGTTCAGCTATGTAATCGTAACTTTGGTATTGGTGCTGATGGAGTTATCTTTGTTATGGCTGGCACCGATGGCGCTGACTATACCATGAGAATATTCAATTCTGATGGTAGTGAGCCTGAGATGTGTGGAAATGGAATGCGGTGTTTTGGCAAATTCGTTGCTAAGCTTGAGAACTTGAAGGGTAGGCAAAGTTTTACTGTGCATACCGGTGCTGGCCTGATTATTCCAGAAATCGTTGGGGACGGAAATGTCAGAGTTGACATGGGGGAGCCAATTCTTAAAGCGTCAGACGTGCCTACTAAATTACCTGCAAATAAGGATCAGTCAGTTGTTGAGGCAGAGCTAGATGTAGATGGAGTTATCTGGAATGTAACATGTGTTAGCATGGGAAATCCACATTGTGTAACACTTGGTACAAAAGAAAGTCAGAATATTGTGGTTGATGATCTGAAGCTAGCAGAAATTGGTCCTAAGTTTGAATATCACAAGATGTTTCCTGCACGAACAAACACAGAATTTGTTCAAGTACTGTCCAATCATCACCTAAAGATGCGTGTGTGGGAGCGTGGAGCAGGAGCAACTCTAGCCTGTGGAACTGGAGCTTGTGCTGTAGTTGTTGCTGCAGTTCTCGAGGGTCGTGCTGAGAGGATTTGCAGGGTTGATCTACCCGGAGGGCCATTGGAGATTGAGTGGAGGGAGGAGAATAATCATGTGTACTTAACAGGCCCAGCTGAATTAGTTTACTATGGATATATACCCCTTTAG 1083 0.4589 MALTAAISLPLTSSRRPSSAVLRPSTSLHAFPSGFAVTTYSVKCPSSRIMASSASIQIPVISSSTSFLDRKETGFLHFAKYHGLGNDFIVVDNRDCLEPKISPDKAVQLCNRNFGIGADGVIFVMAGTDGADYTMRIFNSDGSEPEMCGNGMRCFGKFVAKLENLKGRQSFTVHTGAGLIIPEIVGDGNVRVDMGEPILKASDVPTKLPANKDQSVVEAELDVDGVIWNVTCVSMGNPHCVTLGTKESQNIVVDDLKLAEIGPKFEYHKMFPARTNTEFVQVLSNHHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERICRVDLPGGPLEIEWREENNHVYLTGPAELVYYGYIPL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1610 360 Pfam Diaminopimelate epimerase 78 198 IPR001653 GO:0008837|GO:0009089
Alju01g1610 360 Pfam Diaminopimelate epimerase 232 353 IPR001653 GO:0008837|GO:0009089
Alju01g1610 360 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 210 344 - -
Alju01g1610 360 NCBIfam diaminopimelate epimerase 77 356 IPR001653 GO:0008837|GO:0009089
Alju01g1610 360 ProSitePatterns Diaminopimelate epimerase signature. 139 153 IPR018510 GO:0005737|GO:0008837|GO:0009089
Alju01g1610 360 Hamap Diaminopimelate epimerase [dapF]. 76 360 IPR001653 GO:0008837|GO:0009089
Alju01g1610 360 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 64 359 IPR001653 GO:0008837|GO:0009089
Alju01g1610 360 SUPERFAMILY Diaminopimelate epimerase-like 221 358 - -
Alju01g1610 360 FunFam Diaminopimelate epimerase chloroplastic 200 347 - -
Alju01g1610 360 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 50 207 - -
Alju01g1610 360 FunFam Diaminopimelate epimerase, chloroplastic 50 199 - -
Alju01g1610 360 SUPERFAMILY Diaminopimelate epimerase-like 76 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1610 Alju-ChrAlju01 12949906 12953495 Tandem