LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g1600	ATGAAGAGCATCTGCTTTAGCCCCAAGAAGCCTTCCTTCTCCACCATGACCACCTCCAATCACTCGCTGTCCTCCGATCCGAGCTCATCGCCGGCGACGAGCTTACCTGAATCCAGCATAGACCGCTGCATCGAGGAAGCCCAAGCCTTGATCCACAAGTGGAACTCAGAAACTTCTGCCTACGCTAAAATCACATCCCTATTTTACGAAGACAAATCGGAAGCCTTGCACTACATCAAATGCGTCAACAACCTTCACAAGGCAATGCATCTTCTCCACTCCCACCAGAATCCACTCTCCTCACAAAAGCTCGCTGTCGCCAACAACTTGATGGAGATGGCCATGAAGAGGCTTCAAAAGGAGTTCTATCAAATTTTGTCCATCAATCGGGCCTTCTTAGACCCTGAATCACTCTCCACCGTCAGTAGATCCTCCATCTCCGTCAGCTCCACCATTTCCGATTTCGACATCGAAGATGCTACTACACCAGAGGACGACGTCCGAGTTGCCGGTGATTCTATCTCTGAATTGGAACAAGTCTCTTGGCTCGCCACCAAGGATCTTAGGTCAATAGCCAAGTGTATGATCTCTTGCGGATATGCCAAAGAATGTTTGCAGGTCTATAGAACCATTCGGAAATCCATCATCGATGAGGGCATTTACCGGTTGAACTTGGATAAATTGAAGCCTTCCCAAGTTGATAAGATGGACTGGCAGGTTCTTGATTTGAAAATCAACATGTGGTTGGAGGCTATGAAGGTTGCGGTGAGGACGCTCTTCAACGGAGAGAGAAAGCTATGCGATGATGTCTTCGCCTCTTCGGATTCCATCAGAGAGAGTTGCTTCGCCGACATTTCCAGAGACGGAGCCACTATTCTATTCACATTCCCCCTACACGTCGTCTCCAAAATTAATAAGAACTCGCCGCCGGAGAAAATGTTTCGGCTGCTTGACATGTACATTGTGTTAACTTCTCTGTCGCCGGAGATCCAATCCATCTTCTCTTTCTACTCCACCTCCGAAATTTTAAATCAAGCCAACTATTCTGTGCTCCGGCTCAGCGACTGCGTTCGATCGAAGCTTTCAGAATTCGAGTCCACGATCCAAAAGGACTCATCCAAGTCATCGGTAAAATCAGGCGGACTTCACCCGTTGACAGTACAAGCTATGGACTCCCTCTCAATCCTCTCGGATTACAATAGCGTGCTCTCCGAGATATTCGCCGACTGGAGTCTACCGCCAAAGTCGCCAGCGCCGGAATATTTACTAGAAAGTCCAGATTCCGATGAATCATCGTCCTCGTCGTCAACGACGCCATCGTTCTCTGCTAGAATAGCTTGGCTGATTTTCGTTCTTGTCTGTAAGCTGGACAGCAAAACAAAGCATTGCAAGGACGCTTCGTTGTCTTACCTATTTCTGGCAAATAATCTCCAGCACGTGATAGACACGGTGCGAAACTCGAACTTGCAGTTCGTGCTGGGCGACGAGTGGATCGGGAAGCACGAAGCGAAGATGAAGGGATTCTTGAGTAAGTACGAGAAGTTAGGATGGGGCGAAGTGATTTCGTGCTTGCCGAGAAATCCAAAGGCGGCGATGACGGCGGAGGAGGCGAGGGTCATATTCAGGAACTTCAACTTCCGTTTTGAGGAGGCATATCGGAAGCAGAATTTATACACGGTACCGGAAAGGAGATTCAGAGAGGAGATCAGAGCATCGATAGCGAGAAAAATAGTGCCGACGTATGAGGCGTTCTATGAGATGCACAGGACCACTGTGGCATCAATGAGAGAGATGACCTTGTACGTGACATTTCACCCCGATGACGTGAAAGGTTATCTGGCGAACTTGTTCTTTGCGGGGAATAACTCTGGCAGGGTTAAGACGTCGTCGTCGTCGTCAGTGTCTTCACGTGCGTCATCTCCTCAACGGCAACCTTAG	1938	0.4881	MKSICFSPKKPSFSTMTTSNHSLSSDPSSSPATSLPESSIDRCIEEAQALIHKWNSETSAYAKITSLFYEDKSEALHYIKCVNNLHKAMHLLHSHQNPLSSQKLAVANNLMEMAMKRLQKEFYQILSINRAFLDPESLSTVSRSSISVSSTISDFDIEDATTPEDDVRVAGDSISELEQVSWLATKDLRSIAKCMISCGYAKECLQVYRTIRKSIIDEGIYRLNLDKLKPSQVDKMDWQVLDLKINMWLEAMKVAVRTLFNGERKLCDDVFASSDSIRESCFADISRDGATILFTFPLHVVSKINKNSPPEKMFRLLDMYIVLTSLSPEIQSIFSFYSTSEILNQANYSVLRLSDCVRSKLSEFESTIQKDSSKSSVKSGGLHPLTVQAMDSLSILSDYNSVLSEIFADWSLPPKSPAPEYLLESPDSDESSSSSSTTPSFSARIAWLIFVLVCKLDSKTKHCKDASLSYLFLANNLQHVIDTVRNSNLQFVLGDEWIGKHEAKMKGFLSKYEKLGWGEVISCLPRNPKAAMTAEEARVIFRNFNFRFEEAYRKQNLYTVPERRFREEIRASIARKIVPTYEAFYEMHRTTVASMREMTLYVTFHPDDVKGYLANLFFAGNNSGRVKTSSSSSVSSRASSPQRQP	645

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g1600	645	MobiDBLite	consensus disorder prediction	1	37	-	-
	Alju01g1600	645	MobiDBLite	consensus disorder prediction	624	645	-	-
	Alju01g1600	645	Pfam	Exo70 exocyst complex subunit	247	614	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Alju01g1600	645	MobiDBLite	consensus disorder prediction	8	37	-	-
	Alju01g1600	645	Gene3D	Exocyst complex component Exo70	49	625	-	-
	Alju01g1600	645	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	36	617	IPR004140	GO:0000145\|GO:0006887
	Alju01g1600	645	SUPERFAMILY	Cullin repeat-like	45	617	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g1600	Alju-ChrAlju01	12827386	12829323	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g1600	34	617	EXO70 exocyst subunit family	AT3G09520	48.818	0.0	536