Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1594 ATGTCTCAACCACCTCCGCCGTCGTCCGCGTCGCCCTCCGACGACAGATGTACCTTCTTCAATCAATCCATGGAGCTCGTCCAGCTCCCATATCAAAGGTCAGCCAGAGCCCACGTCTCCCGTAGCCCCTCCCTCGCCGACCTCCTTAAACGCGTCGGAGATGCTCAAAACGGCGCCGTCTCCCAACCACACCAAATCCTCGATCTCGATCCTTCTCCTTCTCCTTCTCCCTCTTACTCTTTCATCCTTTCCTTCACCCACTTGACTTACAGCGTCAGAGTCCGCCGTAAAATGAGCCTCTCCTCTTGCTTCTCTAGAAAACACGTGGATTCGAATTCCCGGATGCCGGAAGTTCATGGCGTGGCTGGATCCGAATCCGAATCGAAGAATAATAATACTAAAGTTCTGCTCAATGATATTTCCGGCGAGGCCCGTGATGGAGAAATCATGGCCGTTCTAGGCGCCAGTGGGTCCGGCAAATCAACACTGATCGACGCCCTCGCCAACAGAATCTCAAAAGAGAGCTTGAAAGGAACTATCAGGCTAAACGGTGAAGCTTTGGATTCCAGTCTTCTGAAAGTGATTTCAGCTTACGTCATGCAGGACGACCTCCTCTTTCCCATGCTCACTGTGGAAGAGACCCTCATGTTCTCCGCCGAGTTCAGGCTTCCTCGCTCCCTCTCTAAGTCCAGAAAGAAGGCCAGAGTCCAAGCTCTCATCGACCAGTTGGGCCTCCGTAACGCCGCCAATACAGTCATCGGTGACGAAGGCCACCGTGGCGTCTCCGGTGGTGAACGACGTCGTGTCTCCATCGGAATTGACATAATTCACGACCCCATCGTCCTGTTCCTCGACGAACCCACCTCAGGCCTTGACTCCACCAGCGCCTACATGGTCGTCAAGGTGCTACAACGAATAGCTCAAACCGGAAGCATCGTCATCATGTCCATACACCAACCAAGTTACAGAATCGTCGGATTATTAGACCGGTTGATTTTCCTCTCACACGGCCAAACCGTATACAGCGGCTCCCCGGCGAATCTGCCGCGATTCTTCTCGGAGTTCGGCAACCCGATCCCCGATAACGAGAACCGCACCGAGTTCGCCCTCGACCTCATTCGTGAGCTCGAACAAAACCCTGGTGGCACCACTGGCTTAGTGGAATTCAGTAAGTCTTGGCAATCGCATCACATGAAAACCAAACCAACCAGCGGCCATGAAACCTCCCATATTAACGGACAAAAGGTTTCGCTCAAGGACGCCATTGGCGCGAGTATTTCTCGAGGCAAGCTGGTCTCTGGGGCGCCAAGGAAGTCGAATAATCTCACAACATCTACGTCTGTTCCAACCTTTGCAAACCCTTTTTGGATTGAAATGGCTGTGATTGCAAAACGGTCAATGATCAATTCCCGAAGAATGCCCGAACTGTTTGGCATTCGATTGGGTGCGGTTCTCGTGACCGGAATCATTCTGGCCACTATCTTCTGGCATCTCGATAGTTCCCCTAAAGGTGCTCAAGAACGATTAGGGTTCTTCGCCTTCGCCATGTCCACCACGTTCTACACGTGCGCCGAAGCCATGCCTGTTTTCCTCCAAGAGCGATACATCTTCATGAGAGAAACCGCCTACAATGCCTACCGTCGATCCTCCTACGTTCTCGCCCATTCAATCATCTCAATGCCACCTTTAATTTTCCTCTCCTTAGCCTTCGCCGCCACAACATTCTGGGCGGTGGGCCTAGCTGGCGGCGCATCGGGGTTCTTCTTCTACTTCTTGATCATCGTGGCGTCCTTCTGGGCGGGAAACTCCTTCGTGACGTTCCTTTCAGGAGTGGTGTCCCACGTGATGCTGGGGTTCACGGTTGTGGTCGCCATTTTAGCTTACTTCGTGCTGTTCAGTGGGTTCTTCATAAGCAGGGACAGAATTCCTGCGTATTGGATATGGTTCCATTATATCTCACTGGTGAAGTATCCATACGAGGGCGTTTTGCAGAACGAGCTTGATATTCAGCCTCCGAGGTGTTTCGTGAGGGGGACTCAGATGTTCGACATGACGCCGTTGGGGGAGGTGCCGGAGACACTGAAGGTAGAGTTGCTGAAGAGTATGAGCAAGACGCTGGGGATGAACATAACGGGGTCGACGTGCGTGACCACGGGAATGGATATACTGAGGCAGCAGGGGATTACTGACCTCAGCAAGTGGAGCTGCCTCTGGATAACCATTGCATGGGGATTTTTCTTCAGGTTTCTGTTTTATGTGGCTTTGATGTTTGGAAGCAAAAACAAGAGGACCTAA 2295 0.5224 MSQPPPPSSASPSDDRCTFFNQSMELVQLPYQRSARAHVSRSPSLADLLKRVGDAQNGAVSQPHQILDLDPSPSPSPSYSFILSFTHLTYSVRVRRKMSLSSCFSRKHVDSNSRMPEVHGVAGSESESKNNNTKVLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRISKESLKGTIRLNGEALDSSLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSRKKARVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAYMVVKVLQRIAQTGSIVIMSIHQPSYRIVGLLDRLIFLSHGQTVYSGSPANLPRFFSEFGNPIPDNENRTEFALDLIRELEQNPGGTTGLVEFSKSWQSHHMKTKPTSGHETSHINGQKVSLKDAIGASISRGKLVSGAPRKSNNLTTSTSVPTFANPFWIEMAVIAKRSMINSRRMPELFGIRLGAVLVTGIILATIFWHLDSSPKGAQERLGFFAFAMSTTFYTCAEAMPVFLQERYIFMRETAYNAYRRSSYVLAHSIISMPPLIFLSLAFAATTFWAVGLAGGASGFFFYFLIIVASFWAGNSFVTFLSGVVSHVMLGFTVVVAILAYFVLFSGFFISRDRIPAYWIWFHYISLVKYPYEGVLQNELDIQPPRCFVRGTQMFDMTPLGEVPETLKVELLKSMSKTLGMNITGSTCVTTGMDILRQQGITDLSKWSCLWITIAWGFFFRFLFYVALMFGSKNKRT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1594 764 Pfam ABC-2 type transporter 461 667 IPR013525 GO:0016020|GO:0140359
Alju01g1594 764 ProSitePatterns ABC transporters family signature. 261 275 IPR017871 GO:0005524|GO:0016887
Alju01g1594 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 351 IPR027417 -
Alju01g1594 764 Pfam ABC transporter 137 289 IPR003439 GO:0005524
Alju01g1594 764 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 113 361 IPR003439 GO:0005524
Alju01g1594 764 Gene3D - 125 352 IPR027417 -
Alju01g1594 764 Pfam ABC-2 type transporter 318 404 IPR043926 GO:0140359
Alju01g1594 764 FunFam ABC transporter G family member 6 126 352 - -
Alju01g1594 764 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 751 - -
Alju01g1594 764 SMART AAA_5 146 361 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1594 Alju-ChrAlju01 12776040 12778334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1594 136 321 Calmodulin-binding Proteins AT2G36910 29.101 1.47e-10 63.2