Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1585 ATGGAAGAAACAGCCACCATATTGGCTGCACTCTCCGCCCTCCCTCCTTCCCACCTCTCCGATCTCACCCACTCCATCGCCTCCGTCGTCCACCACCACAACCTCCGCCTCGCCTCCGTCCTCTCTTCTCAATCCCTCTTCTCCCTCGCCCTCCACTACCTCCACTCCCTCTCTCTTCCCCAAAAATCCCTCCTCATTGCCCGCCACCTCCTCTCTTCCCTCCACACCCTCACGCGCCACCTCGAACCGCCGCCACCGCCGCCTCCATTATCCACTGTCATGAGACAGCGTGACCTCGACGCCGTTCTCCTCCTCCTCTTATTCTGCGATGCGCACCAGCACCACCCACAAGTTCTCGAAGTGCCAGTTCGCGATTGGCGCAGAAATCTGAGCAGGCTCTTCGCCGATAAATTGTTGGGGATTTCTTCTACCCCTATCGGGGAATGCAGCGCCGCGATTTTGATTCCGTATATTGAGATGGTGATACGGTACTGGAGGCTGGTGGGTTCAATGGGATGCGGCGGAGAAAAGGGCGGCGGGGAAGTGGCGGCGTCGAGGGCGGCGGTAGTGGCGCTGCCGAGAGTGGAGGTGAGGGCGGGGGGAAGAGAGTGCGTGATATGCAAAGAGGAAATGAGGGTGGGGAGGGATGTGTGCGAACTGCCATGTCAGCACGTGTTTCACTGGAATTGCATTTTGCCGTGGCTGAGTAAAAGGAATACGTGCCCTTGCTGCCGGTTCCGGCTGCCGTCCGATGATGTTCTTGGAGAGATCCAACGGCTGTGGGAGGTCTTGGTCAAAACGTGTGGGGCAGAGTGGGGCGATTGA 825 0.5891 MEETATILAALSALPPSHLSDLTHSIASVVHHHNLRLASVLSSQSLFSLALHYLHSLSLPQKSLLIARHLLSSLHTLTRHLEPPPPPPPLSTVMRQRDLDAVLLLLLFCDAHQHHPQVLEVPVRDWRRNLSRLFADKLLGISSTPIGECSAAILIPYIEMVIRYWRLVGSMGCGGEKGGGEVAASRAAVVALPRVEVRAGGRECVICKEEMRVGRDVCELPCQHVFHWNCILPWLSKRNTCPCCRFRLPSDDVLGEIQRLWEVLVKTCGAEWGD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1585 274 SUPERFAMILY RING/U-box 200 250 - -
Alju01g1585 274 Pfam Ring finger domain 203 245 IPR001841 -
Alju01g1585 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 152 249 - -
Alju01g1585 274 CDD RING-H2_PA-TM-RING 203 245 - -
Alju01g1585 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 251 IPR013083 -
Alju01g1585 274 ProSiteProfiles Zinc finger RING-type profile. 204 245 IPR001841 -
Alju01g1585 274 SMART ring_2 204 244 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1585 Alju-ChrAlju01 12749734 12750558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1585 2 267 C3H Transcription Factor Family AT5G02750 53.237 4.67e-82 246