Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1580 ATGATTTGGATTCCCTGTTCTGGAAATTCAAACACTAAGAAGAAGACGAAGAAGCCGCCGAAGAGGATGGAGGTGCGGGAGAACATGGTTGATCCGATAAAAGCAGCCCCAGGGAAATTAAAGAGGAATTCATCTACAAATTCCAAGGATACCTCTAAAACTGGGAACCCTGACCACATAGCAGCACAGACTTTCACATTTCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAACTGAATGCTTGTTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTAATAATCAGGTTGTTGCAATTAAGCAACTTGACCGAAATGGGCTGCAAGGGAATAGAGAATTCCTAGTTGAAGTGTTGATGTTAAGTCTACTACACCACCCTAACCTTGTCAGCCTCATTGGTTATTGTGCTGATGGAGATCAAAGGCTTTTAGTTTATGAATATATGCCATTAGGATCCTTGGAAGACCACTTACATGATGTTTCTCCTGGCAAGAATCGTCTTGACTGGAATACAAGAATGAAAATAGCAGCTGGGGCAGCAAAAGGGCTGGAATATCTGCACGACAAAGCTAACCCTCCTGTCATATACCGAGATTTGAAGTGCTCAAACATTTTGCTTGGTGAAGGGTATCATCCAAAGTTATCTGATTTTGGCTTGGCCAAACTTGGACCAGTAGGGGATAACACTCATGTGTCAACAAGGGTTATGGGCACCTACGGTTATTGTGCTCCGGAGTATGCAATGACAGGACAACTCACTCTGAAATCAGATGTCTATAGCTTTGGTGTTGTTCTTCTGGAAATAATTACTGGAAGGAAAGCTATTGACAACTCAAAGGCTGCTGGAGAACAGAATCTTGTTGCATGGGCGAGACCTTTGTTTAAAGATCGACAAAAATTTTCACAAATGGCGGATCCGATGCTCCAAGGTCAGTATCCTTCAAGAGGCTTATACCAGGCCCTTGCAGTTGCTGCAATGTGTGTTCAGGAGCAGGCTAACATGCGTCCAGTTATAGCTGATGTAGTCACAGCTTTGACTTACCTTGCTTCACAAAGATATGACCCAAATTCAGAGTCGCCACAAAGCTCTCGCCGCTCGCCTGCCACTCCTAGAACCAAGAGGGGGCAGTCTACCCCATGTACCGGCATTCTGAAGGAGTCTTTGCTTCTACTTATTTATCAAGAAGCAGAACTTTTCTGGGATTCCCATTCTCAATCACCTAGGAGGCGAGGAGTGGAAGCACCCGATCATCTTCATTCTTGCAAATATGGCGAGAGGTTGAGGATGAGCATGTGA 1314 0.4452 MIWIPCSGNSNTKKKTKKPPKRMEVRENMVDPIKAAPGKLKRNSSTNSKDTSKTGNPDHIAAQTFTFRELATATRNFRTECLLGEGGFGRVYKGRLESNNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEYMPLGSLEDHLHDVSPGKNRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRQKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALTYLASQRYDPNSESPQSSRRSPATPRTKRGQSTPCTGILKESLLLLIYQEAELFWDSHSQSPRRRGVEAPDHLHSCKYGERLRMSM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1580 437 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Alju01g1580 437 Gene3D Transferase(Phosphotransferase) domain 1 154 372 - -
Alju01g1580 437 MobiDBLite consensus disorder prediction 1 58 - -
Alju01g1580 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Alju01g1580 437 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Alju01g1580 437 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Alju01g1580 437 Pfam Protein tyrosine and serine/threonine kinase 81 349 IPR001245 GO:0004672|GO:0006468
Alju01g1580 437 MobiDBLite consensus disorder prediction 359 385 - -
Alju01g1580 437 SUPERFAMILY Protein kinase-like (PK-like) 63 371 IPR011009 -
Alju01g1580 437 CDD STKc_IRAK 83 352 - -
Alju01g1580 437 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1580 437 MobiDBLite consensus disorder prediction 40 58 - -
Alju01g1580 437 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1580 437 PANTHER OS07G0668900 PROTEIN 21 365 - -
Alju01g1580 437 Gene3D Phosphorylase Kinase; domain 1 47 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1580 Alju-ChrAlju01 12687819 12695086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1580 37 356 Glycoside Hydrolase AT3G07070 68.438 1.27e-164 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Alju01g1580 PK_Tyr_Ser-Thr 1.8e-46 CL0016