Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1579 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTGTTGCAAAACCAGTACCTTCAAGGCCTACTTGCCCCCCTTTCAGATCCTTCTCCGAGCTACTTGCAGGTGCCATCAATGCCTCTCCATCTACTGAATCTTCTCAAGCTACAGTTTCGGCCATTAGACCAAAGACTGTGAGATTCAAGGCAGCCGTGAATCGCCCACCTCCTTCTGGGTTTATTTCTTCCAAGGCTAACCCATCTTACAAAAGTCATAAACCAGACACTAATCAAACAGTTGTTTACAAGCCTAAAGCTAAGCTTGTCTCCAAGGCCACTGTTTCTCTTTTGGCAAATATGGGAAATTATAGTACCAGTCATAGCCAGCTGTTTGAACACCCCAATCAGGAGAAACTGAGGACCAATTTGAGCTCAATTAATCATCAGAATAACAACACCCCACGTGCTGAACCAAATCTGGCAATTGAATGTTTCAAGATGGCACATCAGAGCCCAGAGGAGGACCAGAAAACTTCACCATCTACTAGTAATGGTGGTGATAGACCTTGCTATGATGGGTATAACTGGAGGAAATATGGGCAGAAGCAAGTCAAAGGAAGCGAGTATCCGAGGAGTTATTACAAATGCACGCATCCTAATTGCCCAGTGAAGAAGAAGGTTGAAAGATCATTTGATGGTCTGATTGCAGAAATTGTGTATAAAGGGGAACACAACCATTCAAAGCCTCAGCCCCCTAAACGCAACACGGCAGGAACACAAGGATCGGGAGTCGCTTCTGATGGATTGGGTCAAGATACTAACTGTAATAACCATTTATGGGGTAATCCTAACAGTGAGAGGAATGAAAATAGAATGGAGAACCAGAGGGACACGGGTTACCTTGTCAAAGCTGGAGGAAGCCCTGAGAACTCATATGCTCAGAGTGAGGAATGTGAGGAAGGAAGCAAGGTAAATGAAGTGGAGGAAGATGAACCAAAAAGTAAAAGAAGGAAAAACGAGAATCAATCCAATGAAGCAGCAGTAGCAGAGGAAGGTTTAGTGGAGCCTCAAGTGGTGGTTCAGAGTTCTACAGATTCTGAAGTACTTGGAGACGGCTTTCGCTGGAGGAAATATGGCCAGAAGGTGGTGAAGGGCAATCCATATCCCAGAAGTTATTATAGATGCACTAACATAAAGTGCAGCGCCCGGAAACATGTGGAAAGATCAATAGATGACCCAAAAGCATTTATCACTACGTATGAAGGGAAACACAACCATGAGATGCCACGCAAAACTATAGGTGCTGTGGCATCTGGAAAAGTCAAGCCATGA 1302 0.4439 MDVKEAERVVVAKPVPSRPTCPPFRSFSELLAGAINASPSTESSQATVSAIRPKTVRFKAAVNRPPPSGFISSKANPSYKSHKPDTNQTVVYKPKAKLVSKATVSLLANMGNYSTSHSQLFEHPNQEKLRTNLSSINHQNNNTPRAEPNLAIECFKMAHQSPEEDQKTSPSTSNGGDRPCYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGLIAEIVYKGEHNHSKPQPPKRNTAGTQGSGVASDGLGQDTNCNNHLWGNPNSERNENRMENQRDTGYLVKAGGSPENSYAQSEECEEGSKVNEVEEDEPKSKRRKNENQSNEAAVAEEGLVEPQVVVQSSTDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCSARKHVERSIDDPKAFITTYEGKHNHEMPRKTIGAVASGKVKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1579 433 ProSiteProfiles WRKY domain profile. 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 MobiDBLite consensus disorder prediction 159 184 - -
Alju01g1579 433 FunFam WRKY transcription factor 347 420 - -
Alju01g1579 433 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 Pfam WRKY DNA -binding domain 182 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 SUPERFAMILY WRKY DNA-binding domain 353 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 MobiDBLite consensus disorder prediction 232 341 - -
Alju01g1579 433 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 421 IPR044810 GO:0003700
Alju01g1579 433 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 MobiDBLite consensus disorder prediction 164 178 - -
Alju01g1579 433 MobiDBLite consensus disorder prediction 316 334 - -
Alju01g1579 433 ProSiteProfiles WRKY domain profile. 354 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 MobiDBLite consensus disorder prediction 61 86 - -
Alju01g1579 433 FunFam WRKY transcription factor 166 240 - -
Alju01g1579 433 MobiDBLite consensus disorder prediction 241 278 - -
Alju01g1579 433 MobiDBLite consensus disorder prediction 69 86 - -
Alju01g1579 433 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 SMART WRKY_cls 359 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 Gene3D WRKY domain 168 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju01g1579 433 Gene3D WRKY domain 344 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1579 Alju-ChrAlju01 12681961 12683929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1579 351 433 WRKY Transcription Factor Family AT2G37260 45.455 1.65e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju01g1579 WRKY 1.2e-25 CL0274