Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1571 ATGCCGCCTAAGCAGCAAGCGAAAGCTGATTTAGCAAAGAAGCAGAAGATCGTAGAGGATAAAACCTTTGGTTTAAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAGAACCTCAAGCAGTCCGTGCAGCCGAAGCTTGATCCTTCCAAAACCGCTGCCAAGAAAAAGAAGGAGGAGGACAAGGCCAAGGAGAAGGAGCTAAACGAGTTGTTCAAAATCGCTATTACCCAGCCCAAAGTGCCAGTTGGGGTTGATCCCAAGTCCATAGTATGTGAGTTTTTTAAAGCAGGACAGTGTACCAAGGGCTTTAAATGCAAGTTCTCACATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATTTACAGTGACAAGCGCGACCAGGAAACGATGGAGGATTGGGATCAAGAGACCTTGGAGAAGGTGGTGGAGTCCAAGGAAACCGAGTATCAACAGAATAAACCAACTGACATAGTCTGTAAACATTTTTTGGATGCAGTGGAGAAGAAGCAATATGGCTGGTTTTGGGTCTGCCCAAATGGTGGTAAGAATTGCCACTATAGACATGCCCTTCCCCCTGGATATGTTTTAAAATCTCAAATGAAGGCCCTGTTGGAGGAAGAAGCTGAAAGGATGCCAATTGAGGAGGAGATTGAAGATCAGCGCTCCAAATTGAATACAACTACTCCTATGACTCCTGAGTTATTCATGCAATGGAAGGAGAAGAAAATTGCAGAAAGAGATGCCAATTTGGCTGAACAACAGGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGTGAGCTATTTTTGTCCAATGCTAGCTTTTTTGTGGATGATGCCGACGCATATGACAAGTATCAAAGAGAGCCAGAATCTAATGATAATGAGCAGAAGCCACAGGCAAATGGCGATGCCGGTGATGGTCCAAGCCCCTCAACAGCAACTAATGCTGATGCTGAAGAAGCTAACGGTGAAGCGATTGATGTAGACGATGATGACGAGCTAGACATGGATGAATTGAATGAATTGGAAGCAAGTTTATCGAAGACATTAATCCAAATAAAGGAGCCAGGAGCTGAAGCTTAA 1101 0.4387 MPPKQQAKADLAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPKLDPSKTAAKKKKEEDKAKEKELNELFKIAITQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDQETMEDWDQETLEKVVESKETEYQQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEEAERMPIEEEIEDQRSKLNTTTPMTPELFMQWKEKKIAERDANLAEQQAERAKNDRMSGRELFLSNASFFVDDADAYDKYQREPESNDNEQKPQANGDAGDGPSPSTATNADAEEANGEAIDVDDDDELDMDELNELEASLSKTLIQIKEPGAEA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1571 366 MobiDBLite consensus disorder prediction 292 344 - -
Alju01g1571 366 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Alju01g1571 366 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Alju01g1571 366 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Alju01g1571 366 Coils Coil 246 266 - -
Alju01g1571 366 MobiDBLite consensus disorder prediction 328 344 - -
Alju01g1571 366 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 364 - -
Alju01g1571 366 MobiDBLite consensus disorder prediction 40 64 - -
Alju01g1571 366 Pfam DRG Family Regulatory Proteins, Tma46 217 294 IPR032378 -
Alju01g1571 366 Gene3D - 87 200 - -
Alju01g1571 366 MobiDBLite consensus disorder prediction 301 324 - -
Alju01g1571 366 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Alju01g1571 366 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Alju01g1571 366 Gene3D - 202 279 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju01g1571 DFRP_C 9.7e-18 No_clan