Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1569 ATGGCCGCCACAGCTCGCCCGCTCGTCACTGTACAATCTCTCGAGGGTGACATGGCCACTGATGCTGCCCCAGCTGTTCATCTTCCTGATGTCATGAAGGCTGCCATTCGCCCCGACATCGTCAACTTCGTCCACGCCCATATTTCTAAGAATAGTCGCCAACCCTACGCCGTCAGCAAGCGTGCCGGTCACCAGACCTCTGCCGAATCATGGGGTACTGGCCGTGCTGTGTCTCGTATCCCTCGTGTCCCTGGCGGCGGTACCCACCGTGCTGGTCAGGGTGCTTTTGGTAATATGTGTCGTGGTGGTCGTATGTTTGCTCCTACCAAGATTTGGCGTCGCTGGCACCGTAAGATCAATGTCAATCAGAAGCGTTACGCCGTCGTTTCAGCCATTGCTGCCTCGGCAATCCCATCCATTGTTATGGCTCGTGGCCACAGAATTGAGTCTGTGCCGGAAGTGCCTCTTGTAGTCAGCGATTCAGCTGAGGGTGTTGAGAAGACTAAGGATGCTATCAAGGTGCTGAAGCAGGTTGGCGCTTTTCCTGACGCTGAGAAAGCAAAGGACAGCCACTCAATCCGACCTGGCAAGGGTAAAATGAGAAATCGCCGATACATCTCTCGCAAGGGTCCATTGATTGTGTATGGAACTGAAGGAACCAAAGCTGTAAAAGCTTTTAGAAACATTCCAGGGGTCGAGGCTGCTAATGTCGAGAGGCTGAACCTTCTCAAGTTAGCTCCTGGTGGTCATCTGGGTAGGTTTGTTATTTGGACGAAGTCTGCTTTTGAGAAGCTTGATTCGATTTATGGGTCATTCGATAAGCATTCAGAGAAGAAGAAAGGCTACTTTCTTCCAAGGGCCAAGATGGTTAATAGTGATTTGGCTAGGATTATCAACTCGGATGAGATTCAATCCGTGGTGAGACCCATCAAGAAGGAAATTAAGAGGGCGCCGCTCAAGAAGAACGCGCTTAAGAACCAGAATACTATGTTTAAACTGAACCCATATTATAAGACTGCCAAGAGAAATGCTCTTCTTGCTGAGGCTCAACGGGTTAAAGCAAAGAAAGAGAAGCTTGATAAGAAGAGAAGTTCTCTCTCTAAGGAGGAGGCTTCTGCTATTAAGGCTGCAGGAAAAGCGTGGTATCAAACCATGGTGTCGGACTCCAATTATGCAGAATTTGAGAACTTTTCGAAGTGGTTGGGTGTTTCACAGTGA 1218 0.4926 MAATARPLVTVQSLEGDMATDAAPAVHLPDVMKAAIRPDIVNFVHAHISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSIVMARGHRIESVPEVPLVVSDSAEGVEKTKDAIKVLKQVGAFPDAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGTKAVKAFRNIPGVEAANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKHSEKKKGYFLPRAKMVNSDLARIINSDEIQSVVRPIKKEIKRAPLKKNALKNQNTMFKLNPYYKTAKRNALLAEAQRVKAKKEKLDKKRSSLSKEEASAIKAAGKAWYQTMVSDSNYAEFENFSKWLGVSQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1569 405 MobiDBLite consensus disorder prediction 54 94 - -
Alju01g1569 405 Pfam Ribosomal protein L4/L1 family 27 266 IPR002136 GO:0003735|GO:0005840|GO:0006412
Alju01g1569 405 SUPERFAMILY Ribosomal protein L4 9 267 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju01g1569 405 Coils Coil 337 369 - -
Alju01g1569 405 ProSitePatterns Ribosomal protein L1e signature. 120 146 IPR013000 -
Alju01g1569 405 PANTHER 60S RIBOSOMAL PROTEIN L4 5 398 IPR045240 -
Alju01g1569 405 Gene3D - 3 308 IPR023574 GO:0003735|GO:0005840|GO:0006412
Alju01g1569 405 MobiDBLite consensus disorder prediction 54 73 - -
Alju01g1569 405 FunFam 60S ribosomal protein L4 3 308 - -
Alju01g1569 405 Pfam 60S ribosomal protein L4 C-terminal domain 280 352 IPR025755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1569 Alju-ChrAlju01 12599860 12601671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1569 2 405 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 81.188 0.0 665