Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1568 ATGTTGGATCTTAATCTCAACGTCGTTTCATCTGATTCCGCGTCGAATTCCGTTGACGTGCCTGCTGAGAATGTTTTGCTGCTTTCTGGTAGCCCAATGGATAGCTCTGGAAGCTTTAATTCTTCCATCGTCAATGCCGATACCTCAACCAATACTTTTGATGAAGACTCTTGCTCTTGTGGCGATGCCTTTGCTAACAACTTCGGAACAGTGAACAAGAATAACATAAATGATGGCACAAGCGACAAAGCAGTTAATCTTCTAGTAGGTGAAGGTGAAGATGTCTGTGATCGGACCATCCAGCTTTTTCCTATCGCTGGTGCCGGAGATGGTCGGGTCACTGAATTGAGGGCGGGTCAGCGATTTCCAGGTTCGTCTTCAAGTAAGGGATGGTTAGATTTCCTGTGCCAGGAGGTGGGTCCCGGTGGAACGCTGGAACAGAGGATGCCGCCGCAGCAGCAGCAGAGACCGCAGGTCAAGAAGAGTCGGCGGGGACCGAGGTCGCGGAGCTCGCAGTATCGCGGTGTTACATTTTATCGAAGAACTGGAAGATGGGAATCGCATATATGGGATTGTGGGAAACAAGTGTACTTGGGCGGATTTGATACAGCACATGCTGCGGCAAGGGCATATGATCGAGCCGCAATCAAGTTCCGTGGCCTTGAGGCTGATATTAATTTCAATGTTAGTGATTATGCAGAGGATATAAGGCAGATGGGTAATTTCACAAAGGAAGAGTTTGTGCATATTCTGCGGCGACAGAGCACTGGCTTTTCAAGGGGAAGCTCTAAATATAGAGGAGTTACTCTGCATAAATGTGGGCGATGGGAAGCTCGCATGGGGCAGTTTCTAGGGAAGAAGTATATATATCTTGGGCTATTTGATAGCGAAATAGAGGCTGCAAGGGCGTATGATAAAGCAGCTATAAAATGCAATGGGAAGGAAGCAATGACAAACTTTGAGCCAAGCTCATACGAAGGGGAGATAATCTCTCAGGCTGATAATGAAGATGGCAACCCAAATCTTGATCTTAGCCTGGCCATTGCTCCCCCTGCTTACACTGATGGTTTTCAAGTCCAGCATGGCTGGGCCAATCTTCCTGCTGATGGGAGAGTTGCGTTCGAGAACTCTGCATCAAGGTTTATGAATGGTCAACCATCTCATGTTTTCCCGATGGCGCCCCAGCATCCTTCTGCCTGGAACAGTACTGATTTCTTTCCCATCAATCAGGAAAGAGCAATGGAGAAGAGAATGGAAGCTAATTCCCTGCCAAACTGGGTATTTCAATACCAAGCTCCCTATGGCGAGGCGTCTTTGATTCCATCCTTCTCTGCTGCAGCATCATCAGGATTCCCTTCAACAAGGTTACTGCTACCAGCAGCTGATAGTCAGATTCATTTCCCAAATATGACGATCCATCCTTAG 1425 0.4758 MLDLNLNVVSSDSASNSVDVPAENVLLLSGSPMDSSGSFNSSIVNADTSTNTFDEDSCSCGDAFANNFGTVNKNNINDGTSDKAVNLLVGEGEDVCDRTIQLFPIAGAGDGRVTELRAGQRFPGSSSSKGWLDFLCQEVGPGGTLEQRMPPQQQQRPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNVSDYAEDIRQMGNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEIEAARAYDKAAIKCNGKEAMTNFEPSSYEGEIISQADNEDGNPNLDLSLAIAPPAYTDGFQVQHGWANLPADGRVAFENSASRFMNGQPSHVFPMAPQHPSAWNSTDFFPINQERAMEKRMEANSLPNWVFQYQAPYGEASLIPSFSAAASSGFPSTRLLLPAADSQIHFPNMTIHP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1568 474 FunFam AP2-like ethylene-responsive transcription factor 263 323 - -
Alju01g1568 474 SUPERFAMILY DNA-binding domain 263 322 IPR016177 GO:0003677
Alju01g1568 474 MobiDBLite consensus disorder prediction 142 173 - -
Alju01g1568 474 Pfam AP2 domain 263 312 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 CDD AP2 172 230 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 SUPERFAMILY DNA-binding domain 171 230 IPR016177 GO:0003677
Alju01g1568 474 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Alju01g1568 474 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 145 345 - -
Alju01g1568 474 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 PRINTS Ethylene responsive element binding protein signature 265 276 IPR001471 GO:0003700|GO:0006355
Alju01g1568 474 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Alju01g1568 474 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1568 Alju-ChrAlju01 12594458 12597028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1568 159 347 AP2-EREBP Transcription Factor Family AT4G36920 81.026 3.48e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju01g1568 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1568 01 12594458 12597028 Alju01g1568 01 12594458 12597028 ECH