Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1560 ATGGGTGGCGCCGCAGCCCATATTACACGTGGCGTTTTGTGGTTCGTTCAACAGTTCCTCGGGTCCCAAGCCAAGTGGCTACCACCCCGCCCCGGGCCTCAGCGTGCAATCATCCTGGCCGTTCGCTGTGGAACAACGGCCTCAATTCAGCTACCCCTTAAACAAAAGCTAGAATAATTTGCTATTACCATGGGGAAGAGTTACCCAGCTGTTAGCCAGGAGTATCTGAAAGCTGTCGGTAAGTGCAAGAAGAAGCTCAGAGGACTTATTCAAGAGAAGCATTGTGCTCCCATCATGCTCCGATTGGCATGGCACTCATCTGGTACCTTCGATGTGAAGACGAAGACAGGAGGACCATTTGGTACCATAAGGCACCCAGCAGAGCTCGCCCATGAGGCAAACAATGGTCTCGACATTGCAGTCAGGCTTCTGGAGCCGATCAAGCAGCAGTTTCCAATAATTTCTTACGCTGACTTGTATCAGTTGGCTGGAGTTGTGGCGGTGGAGGTTACTGGAGGACCCGATATTCCCTTCCACCCTGGGAGAACGGACAAAACTGAGCCACCTCCAGAAGGTCGCTTACCAAATGCCACAAAAGGTTCGGATCATTTAAGGGATGTCTTTGGCCACATGGGTCTATCTGATAAAGATATAGTTGCCTTATCTGGTGGCCACACACTGGGAAGGTGCCACAAAGAACGCTCTGGATTTGAGGGACCTTGGACACAGAACCCTCTCTTTTTTGACAACTCTTATTTCAAGGAACTCCTCAGCGGAGAGAAAGAAGGTTTGATTCAGCTGCCATCAGACAAGGCCCTTCTAAGTGATCCAGTCTTCCGTCCTCTTGTTGAAAAATATGCCGCCGACGAGGATGCGTTCTTTGCGGACTATGCTGATGCTCACCTCAGGCTTTCCGAACTCGGATTTGCGGATGCAGAGTAA 942 0.5064 MGGAAAHITRGVLWFVQQFLGSQAKWLPPRPGPQRAIILAVRCGTTASIQLPLKQKLEXFAITMGKSYPAVSQEYLKAVGKCKKKLRGLIQEKHCAPIMLRLAWHSSGTFDVKTKTGGPFGTIRHPAELAHEANNGLDIAVRLLEPIKQQFPIISYADLYQLAGVVAVEVTGGPDIPFHPGRTDKTEPPPEGRLPNATKGSDHLRDVFGHMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTQNPLFFDNSYFKELLSGEKEGLIQLPSDKALLSDPVFRPLVEKYAADEDAFFADYADAHLRLSELGFADAE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1560 313 MobiDBLite consensus disorder prediction 176 201 - -
Alju01g1560 313 Gene3D Peroxidase, domain 2 195 301 - -
Alju01g1560 313 FunFam L-ascorbate peroxidase, cytosolic 195 301 - -
Alju01g1560 313 Gene3D - 82 308 - -
Alju01g1560 313 Pfam Peroxidase 84 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 SUPERFAMILY Heme-dependent peroxidases 68 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Haem peroxidase superfamily signature 96 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 CDD ascorbate_peroxidase 68 309 - -
Alju01g1560 313 ProSitePatterns Peroxidases active site signature. 96 107 IPR019794 GO:0004601
Alju01g1560 313 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 48 308 IPR044831 GO:0004601|GO:0034599
Alju01g1560 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 217 227 IPR019793 -
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 193 210 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 96 111 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 233 257 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 75 95 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 259 284 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 172 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 153 171 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 114 124 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 128 152 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 PRINTS Plant ascorbate peroxidase signature 211 232 IPR002207 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 ProSiteProfiles Plant heme peroxidase family profile. 137 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Alju01g1560 313 FunFam Cytosolic ascorbate peroxidase 82 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1560 Alju-ChrAlju01 12544505 12547652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1560 135 308 Peroxidase AT4G17690 32.075 9.38e-19 83.6