Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1547 ATGACTCCCTCTACTTCGATCAAATCGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTTTCAGCCCAGAGTCAAAGAAAAAGGAAGATCAGAAATCAAGCAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGGAGATCTCCTCAGATTCATACGTGGGTTCTGAGAAAACAGAATGTCCCCCTGCTCCGCCAACTGAAGAAATTAAATCATATAATGTTGAGAATGAAGCCAGCCAAAGTCATGTTCATGAAGTTGCAACTGCTGTGGAAGCTGAGAGACCAATCCCTGCCACTCAGACACCAGTTGTTGCAATTCAAGCCCCTAAAATCTCTCGGTTTGCCGGTAAATCAAGGGAAGAGGTTGCTGCAATAAAGATTCAGACAGCTTTTAGGGGCTATCTGGCAAGAAGAGCTTTGCGAGCTCTAAGAGGGCTGGTCAGATTGAGGACACTAATGGAAGGGCCAATTGTAAAACGCCAAGCCACTAGCACTCTTCGTTCTATGCAAGCTTTAGCTCGTGTGCAGTCTCAGATTCGTTCTAGGAGGATCAGGATGTTCGAGGAGAATCAGGCTCTGCAAAAACAGCTCTTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGAAGAGGAATGGGATGATAGCCTGCAATCCAAAGAACAAATTGAAGCCAAGTTACTACAAAAGTATGAGGCAGCCATGAGAAGAGAAAAAGCTCTGGCATATGCATTCACTCATCAGCAAACATGGAAGAATTCATCGAGATCAATAAACCCAATGTTCATGGATCCAACAAATCCTTCATGGGGCTGGAGCTGGCTGGAACGGTGGATGGCAGCTCGGACATGGGAGAGCCGAAGCACAATGGAGAAAGAAATGAACGATGACCGTTCATCTGTGAGAAGTTGTAGCCGCAGCGTCACCGGCGGCGGAGAAATCAGCAAATCATATGCTCGTTACCAACTCAATTATGAAAAGCAATCTCCCACAGCAAGCCAAATCAACGACTCACCTAGCTTCAGATCATACTCAACTCCTTCAAAGCCAGCTTACAGAAAACTCAAGAAGGCTAGCCCAAAGAACAGTTTTGCAATGGATGATGATGTTAGAAGTTCAGCCAGTGCGCAGTCAGGGAGGTTCCGGCGGCATTCCATTGGTGGCGCGTCGGTTATAGACGACGAGAGCCTTGCGAGCTCGCCGGCGGTTCCGAGTTACATGGTGGCGACTCAGTCTGCAAAAGCTAAGTCTAGGACGCAGAGTCCATTGGCAGCTGAGAATGGCACGCCCCAGAAGGAGAGAGATAAAGGGTCTTTTGGGACCGCAAAGAAACGGCTTTCTTACCCGCCGTCGCCGGCGAGGCCACGGCGGCATTCGAGTGGGCCACCGAAGGTAGAAAACAACTTAAATGCAGAAATCACTATGGATAATGGTGGGGCTGCTTAA 1476 0.477 MTPSTSIKSRNAKKMGRKGNWFSTVKKAFSPESKKKEDQKSSKSKKKWFGKQKLEISSDSYVGSEKTECPPAPPTEEIKSYNVENEASQSHVHEVATAVEAERPIPATQTPVVAIQAPKISRFAGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLRTLMEGPIVKRQATSTLRSMQALARVQSQIRSRRIRMFEENQALQKQLLHKHAKELESMRIEEEWDDSLQSKEQIEAKLLQKYEAAMRREKALAYAFTHQQTWKNSSRSINPMFMDPTNPSWGWSWLERWMAARTWESRSTMEKEMNDDRSSVRSCSRSVTGGGEISKSYARYQLNYEKQSPTASQINDSPSFRSYSTPSKPAYRKLKKASPKNSFAMDDDVRSSASAQSGRFRRHSIGGASVIDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENGTPQKERDKGSFGTAKKRLSYPPSPARPRRHSSGPPKVENNLNAEITMDNGGAA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1547 491 MobiDBLite consensus disorder prediction 417 491 - -
Alju01g1547 491 SMART iq_5 128 150 IPR000048 GO:0005515
Alju01g1547 491 Pfam IQ calmodulin-binding motif 132 150 IPR000048 GO:0005515
Alju01g1547 491 Gene3D iswi atpase 126 164 - -
Alju01g1547 491 MobiDBLite consensus disorder prediction 417 437 - -
Alju01g1547 491 ProSiteProfiles IQ motif profile. 129 157 IPR000048 GO:0005515
Alju01g1547 491 MobiDBLite consensus disorder prediction 376 390 - -
Alju01g1547 491 MobiDBLite consensus disorder prediction 339 357 - -
Alju01g1547 491 MobiDBLite consensus disorder prediction 1 51 - -
Alju01g1547 491 MobiDBLite consensus disorder prediction 339 391 - -
Alju01g1547 491 MobiDBLite consensus disorder prediction 300 320 - -
Alju01g1547 491 PANTHER IQ-DOMAIN 5-RELATED 15 461 - -
Alju01g1547 491 MobiDBLite consensus disorder prediction 29 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1547 Alju-ChrAlju01 12445112 12447556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1547 15 491 IQD Protein Family AT5G03040 50.403 1.23e-139 408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1547 01 12445112 12447556 Alju03g2661 03 52707824 52711008 CCT
Alju01g1547 01 12445112 12447556 Alju01g1547 01 12445112 12447556 ECH