Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1531 ATGAGCGTTATCGACATTCTAACCAGAGTTGATTCGATCTGCAAGAAGTACGATAAATACGACGTCGACAAGCACAAGGATTCCAATATCTCCGGCGACGATGCATTTGCTCGACTCTACGCTGTAGTCGAAGCTGACATCGAGGCAGCTCTTGAGAAATCAGAAACTGCTTCGAAGGAGAAAAGTAGGGCATCTGTTGTGGCCATCAATGCTGAGATTCGTCGTACCAAGGCTCGGTTGCTGGAGGAGGTCCCCAAGTTGCAGAGATTGGCTGTAAAGAAGGTAAAAGGGCTTTCATCAGAAGAATTTGCTGCTCGTAACGATTTGGTTTTTGCATTGCCAGAGAGGATCCAAGCTATCCCAGATGGGACCCCTGCTGCTCCCAAAAAAACAGGTGGTTGGGCTTCTTCTGCTTCCCGTACTGAAATTAGGTTTGATTCAGATGGTCAATTTGACGATGAATACTTCCATCAAACTGAGGAATCAAGTAAATTTCAGCAAGAGTTTGAAATGCGCAAAATGAAGCAGGATCAAGGTTTGGATATGATTGCAGAAGGCTTGGATACATTGAAAAACATGGCACACGATATGAATGAGGAACTAGATAGACAAGTTCCACTGATGGATGAGATTGACGCTAAGGTGGACAAAGCATCATCTGACCTAAAGAATACCAATGTCAGGCTTAAAGACACAGTGACCCAGCTTCGATCCAGTCGAAATTTCTGTATTGATATTGTGCTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAATGTACTGAAGAAATGA 798 0.4323 MSVIDILTRVDSICKKYDKYDVDKHKDSNISGDDAFARLYAVVEADIEAALEKSETASKEKSRASVVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSEEFAARNDLVFALPERIQAIPDGTPAAPKKTGGWASSASRTEIRFDSDGQFDDEYFHQTEESSKFQQEFEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVTQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1531 265 Gene3D - 177 241 - -
Alju01g1531 265 SUPERFAMILY SNARE fusion complex 166 230 - -
Alju01g1531 265 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Alju01g1531 265 CDD SNARE_Qc 175 230 - -
Alju01g1531 265 Pfam SNARE domain 207 256 IPR000727 -
Alju01g1531 265 SMART tSNARE_6 165 232 IPR000727 -
Alju01g1531 265 PANTHER SYNTAXIN 46 252 IPR045242 -
Alju01g1531 265 FunFam Putative syntaxin-71-like 170 231 - -
Alju01g1531 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1531 Alju-ChrAlju01 12272650 12275194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1531 1 264 SNARE and Associated Proteins AT3G09740 77.068 2.66e-155 431