Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1530 ATGGCTAAAGTGAATGCATTTCGTTTGCCACAACTAGAACAAGACAGCTGTAAGGCTTTGTTTGGAGAGGATGAGTGGTTCTTCTTTACTCCGAGGGACAGGAAGTATCCGAATGGCTTGAGGCCAAACAGAGCAGCAGGGTCAGGTTATTGGAAGGCTACGGGGACTGATAAACCAATTCTTAGTTCGTGTGGAATGAAGAGCATAGGAGTGAAGAAAGCCCTCCTGGATGATTGGGTGCTGTGCAGGGTTCGACAAAAAATCAGCAGCCCTAGAATCACTTGGGAGGAGTCGAATGAACCTAGTAATAATGGACCTGCAAGCTACTTTCAACCGATGAATAATTATGAGATTCATCATGATGCTGATGAAACTGTCAAAAACAGTCAGCTCAATGAATTTCCCATGTTGCCATATATTCTAGGATCTAAGACGAATAATACTCTTCCTTGCATGGCAAATGCAACATCAAGCTTAAGCTATCAGCGTACCGATAATGCTTTTGTCCATGAAGACATCTCAAACATAGAAGCAGCACAGTTCTCAGAATCTACTGATGATGAGAGCTTGAGGAGAAAGCTCTGTGAACATAACCAAATGAATCTTTATGATTCTCCTCCCTTTAAGAAGCTAAGAGGGGAAGATCATGAGAGAGACTTGCTAGCAATAGACATAAGCAAAAGCTACAACAGTGGTTTCAGCAGCTTTGATCATTGGAATGCCATCATACAGCCTCAAGAGCTTAATAACGTGGCCTTTGCAGGATATATTTGA 774 0.4238 MAKVNAFRLPQLEQDSCKALFGEDEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGTDKPILSSCGMKSIGVKKALLDDWVLCRVRQKISSPRITWEESNEPSNNGPASYFQPMNNYEIHHDADETVKNSQLNEFPMLPYILGSKTNNTLPCMANATSSLSYQRTDNAFVHEDISNIEAAQFSESTDDESLRRKLCEHNQMNLYDSPPFKKLRGEDHERDLLAIDISKSYNSGFSSFDHWNAIIQPQELNNVAFAGYI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1530 257 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 75 - -
Alju01g1530 257 Gene3D NAC domain 2 76 IPR036093 GO:0003677|GO:0006355
Alju01g1530 257 Pfam No apical meristem (NAM) protein 19 75 IPR003441 GO:0003677|GO:0006355
Alju01g1530 257 ProSiteProfiles NAC domain profile. 1 124 IPR003441 GO:0003677|GO:0006355
Alju01g1530 257 SUPERFAMILY NAC domain 19 87 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1530 Alju-ChrAlju01 12268350 12270843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1530 1 96 NAC Transcription Factor Family AT1G61110 43.262 4.10e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g1530 NAM 1.1e-07 No_clan