Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1520 ATGACCAAAGACCTCGAGGGAGCCGCTCCTCACAAGGACTATCATGACCCCCCTCCCGCTCCTCTCCTCGACGCCGGCGAGCTCCGCAAGTGGTCCTTCTACAGGGCCGTCATCGCCGAGTTCGTCGCCACCCTCCTCTTCCTCTACATCACTATCCTCACCGTTATTGGTTACAAAAGCCAGAGCGACGCCGCTCATAACGGAACCGCCTGCGACGGCGTTGGCATTCTTGGCATTGCCTGGGCCTTTGGCGGCATGATTTTCATTCTCGTCTACTGCACCGCCGGCATTTCTGGAGGACACATAAACCCGGCCGTCACATTCGGGTTGTTCTTGGCAAGGAAGGTGTCGCTGATTAGAGCGGTTGCGTACATGGTGGCTCAGTGCCTGGGAGCCATATGTGGGTGTGGCCTGGTCAAGGCTTTCCAAACGGCCTACTACAACAGGTATCAGGGTGGAGCCAACATGTTGTCTTCCGGCTACAGTAAAGGCACTGGTTTGGGTGCTGAGATTATCGGTACCTTCGTCCTTGTCTACACCGTCTTCTCTGCCACCGATCCCAAGAGGAATGCCAGAGACTCTCACGTTCCTGTGTTGGCTCCTCTTCCAATTGGATTCGCGGTGTTCATGGTTCACCTGGCCACCATCCCCATCACCGGCACCGGCATAAATCCGGCCCGGAGCTTTGGGGCCGCAGTCATTTACAGCAATCAGATGGCATGGGATGACCACTGGATCTTCTGGGTCGGACCCTTCATCGGTGCCGCCATTGCCGCAATTTACCACCAGTATGTGTTGAGAGCTCAAGCGGCCAAAGCTCTGGGCTCTTTCAGGAGCAGCTCGAATTTGTAA 852 0.5622 MTKDLEGAAPHKDYHDPPPAPLLDAGELRKWSFYRAVIAEFVATLLFLYITILTVIGYKSQSDAAHNGTACDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGCGLVKAFQTAYYNRYQGGANMLSSGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYSNQMAWDDHWIFWVGPFIGAAIAAIYHQYVLRAQAAKALGSFRSSSNL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1520 283 FunFam Probable aquaporin PIP1-2 20 281 - -
Alju01g1520 283 CDD MIP 35 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 Pfam Major intrinsic protein 27 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 Gene3D Glycerol uptake facilitator protein. 20 283 IPR023271 -
Alju01g1520 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 277 IPR034294 -
Alju01g1520 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 NCBIfam MIP family channel protein 39 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1520 283 SUPERFAMILY Aquaporin-like 27 267 IPR023271 -
Alju01g1520 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1520 Alju-ChrAlju01 12208635 12209826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1520 1 283 Major Intrinsic Protein MIP AT2G37170 81.754 1.75e-172 478