Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1505 ATGAAGAGAAAGTTTCTGAGAGGGTGCCTTAACAAGTGGAAGAAGATGAAGAGTAGTGTCACACCTTGTTGTGTCGGTGAGTGTTGCAGCAAATGGGCTTCATGGTCGGCCATGCATGAAAGAAGATCAATCCCAAGTGATGTCCCAAAGGGTCACCTTGTTGTGTATGTAGGAGATAATTTCAAGAGATTTGTAATCAAAGTCACATTACTGAACCATCCACTCTTCAAGGCATTGCTGGATCAAGCTCGGGAAGAGTACGATTTTGTTTCTTATTCAAAACTTTGCATCCCCTGCGAGGAGCATCACTTCCTCAGTGTCCTTCGCTGTGCTAGCTCTCCCAAGAACAAAGGAGCGACTCTTTCCCCGATCATCAGCAAGAATACTCAGTACGGAGATGAAATGAAGAAGTTTGGGAAGAAGGACATGAGAATTGAGAAGTTGAGAATTATAACACCAGACAGCCCTAATGAGGCTATAGTGACAGTTATAAGATATCTCCATGCCGCATTGAGAATTACATTCTTTCGTTTCAAAAAGTATCATCACCAACAAGAATTGGTTGAACCAATTAAATCACTGCATGAATAA 591 0.4196 MKRKFLRGCLNKWKKMKSSVTPCCVGECCSKWASWSAMHERRSIPSDVPKGHLVVYVGDNFKRFVIKVTLLNHPLFKALLDQAREEYDFVSYSKLCIPCEEHHFLSVLRCASSPKNKGATLSPIISKNTQYGDEMKKFGKKDMRIEKLRIITPDSPNEAIVTVIRYLHAALRITFFRFKKYHHQQELVEPIKSLHE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1505 196 Pfam Auxin responsive protein 13 110 IPR003676 GO:0009733
Alju01g1505 196 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1505 Alju-ChrAlju01 12041906 12043954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1505 45 124 Calmodulin-binding Proteins AT3G43120 45.679 9.61e-19 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1505 01 12041906 12043954 Alju01g1505 01 12041906 12043954 ECH