Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1502 ATGAAGTGTTTTCGATTTCACTATGGGGAGAAGAAGGAAGAACCGACGAGCATTAAGTCAGCTTCGGGTCAGTCCAACAGTTCCACAAATGCTGAGGATGATGTGAGAAGATCTGGTTCTGAATTGAATTATAAGGATGCTTCTGAAAACAGTACAGAATCCCTTAGGAGGACTGCATTGCCCAGTTTGTCTCAAAGACCCAGCAACCTGAAAGTTTTCACTGTTCCTGAACTAAAATCAGCCACTAAGAATTTCAGTCGCTCTGTCATGCTTGGAGAGGGAGGATTTGGATGTGTATACAAGGGATTCATCAAGAGTGGAGACGATCCTAACAAAAAAATTGAAGTTGCTGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGCCATAAAGAATGGGTGACAGAAGTTAATGTTCTGGGCATTGTTGAGCATCCCAATCTGGTAAAACTAGTGGGTTACTGTGCAGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGCGTGGAACACCACTTATCACCCCGTTCAGAGAATCCTCTCTCATGGAATAGAAGGTTGAAAATAGCTGAAGATGCAGCTCGGGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCAAACATCCTTCTGGATGAGCATTGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGATATGCAGCTCCTGAATATGTTCAAACTGGCCGTCTGACATTCAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGCCGCCCTTTTGATCGAAATCGTCCAAAGAGCGAGCAGAAGCTCTTGGAATGGGTGAGACCATACTTATCAGATGGGAAGAAATTTCAACTAATATTGGATCCGAGGCTTGAAAGGAAACACATTTTTAAGTCAGCTCAAAGACTTGCTATTGTAGCCAACCGATGTTTAGTCAAAAACCCTAAGAGTCGCCCTAAGATGAGTGAGGTATTAGATTTGGTGAATCAGATTGCCCAATCTTCATTGAGTGCAAGTCCAGAGCTACCCCTGAAGAATTTTGCATCGACACAAGTGGCACAAGAAACCAAATCAAAGAACAAGAGAAGGGTTATGGACCTGAAACCTGGAGAAACTAATTGGTTTTTTAGGATATGGAGACCAAAACATCAAAGAGCTATTCCCAAGAAGTTTTGCAAAGTTCCGTTTCTGAAGAGATACATTTTAGATACACCGATATTACGCTTGGATGATACAGAAATTTTCAGACTAGAAAAAACAAAAGGAATCCAAGGTGCATTGTTGCTGGTGAAGAACAGCTCCAACATTGCCTAG 1428 0.4209 MKCFRFHYGEKKEEPTSIKSASGQSNSSTNAEDDVRRSGSELNYKDASENSTESLRRTALPSLSQRPSNLKVFTVPELKSATKNFSRSVMLGEGGFGCVYKGFIKSGDDPNKKIEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLSWNRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTFKSDVWSYGVFLYELITGRRPFDRNRPKSEQKLLEWVRPYLSDGKKFQLILDPRLERKHIFKSAQRLAIVANRCLVKNPKSRPKMSEVLDLVNQIAQSSLSASPELPLKNFASTQVAQETKSKNKRRVMDLKPGETNWFFRIWRPKHQRAIPKKFCKVPFLKRYILDTPILRLDDTEIFRLEKTKGIQGALLLVKNSSNIA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1502 475 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Alju01g1502 475 MobiDBLite consensus disorder prediction 1 61 - -
Alju01g1502 475 SUPERFAMILY Protein kinase-like (PK-like) 61 364 IPR011009 -
Alju01g1502 475 Gene3D Transferase(Phosphotransferase) domain 1 171 384 - -
Alju01g1502 475 ProSiteProfiles Protein kinase domain profile. 85 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1502 475 MobiDBLite consensus disorder prediction 44 61 - -
Alju01g1502 475 CDD STKc_IRAK 91 369 - -
Alju01g1502 475 PANTHER OS01G0588500 PROTEIN-RELATED 39 369 - -
Alju01g1502 475 FunFam Serine/threonine-protein kinase BIK1 51 170 - -
Alju01g1502 475 MobiDBLite consensus disorder prediction 18 33 - -
Alju01g1502 475 MobiDBLite consensus disorder prediction 1 17 - -
Alju01g1502 475 Pfam Protein kinase domain 87 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1502 475 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Alju01g1502 475 Gene3D Phosphorylase Kinase; domain 1 59 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1502 Alju-ChrAlju01 12010471 12018614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1502 1 363 Glycoside Hydrolase AT3G07070 43.089 1.47e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju01g1502 Pkinase 2.4e-47 CL0016